Gene CHAB381_0202 details

Gene Information

• Locus tag: CHAB381_0202
• Symbol: tkt
• ID: 5407996
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 179436
• End bp: 181346
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640869916
• Product: transketolase
• Protein accession: YP_001405810
• Protein GI: 154148146
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAA AAATTTCAAA CACAATAAAA TTTTTAAGTG CGGATATGAT CCAAAAAGCA 
AATTCAGGAC ATCCTGGAAC ACCTATGGGA TTAAGCGATG TTATAACTGT ACTTATGCGC 
CATATCCGCC ATAATCCAAA GAATCCGAAA TGGTTGAATC GTGACAGATT GGTATTTTCA 
GGTGGCCACG CAAGCGCTTT GATTTACAGC TATTTATATC TTACAGGTTA TGATTTGAGC 
TTAGATGATC TTAAAAGTTT TCGTCAAATT TACAGTAAAA CTCCGGGACA TCCTGAAATC 
ACAACTCCTG GAATTGAAAT AGCAACAGGA CCGCTTGGTC AAGGCATAGC AAATGCAGTC 
GGTTTTGCAA TGGCAGCAAA ATTTGCCGCA AATTTACTGA ATGAAGATAA AAATAAAATT 
ATAGATCATA AAGTTTATTG TATTTGTGGC GATGGCGATT TGGAGGAAGG TATAAGCTAT 
GAAGCCTGCT CAATTGCCGG AAATCAGAAT TTGGATAATT TGGTAATAAT TTATGATTCA 
AACAATATCA CAATTGACGG CAATACAAAC ATTACGTGGG ATGAAGATGT AAAAGTGCGC 
TTTGAAGCAC AAGGTTTTGA AGTAGCAAGA ATCGACGGAC ACAATTTTGA TCAAATCGAA 
TTTGCATTAA ATGAAGTAGC CAACAAGACA AAGCCATATT TAATTATCGT AAATACAGCA 
ATCGGAAAAG GCGCTTTAGA GCTTGAAGGA AGTGCAAAAA CTCATGGTTC GCCACTTGGA 
GAAGACTTAA TTGCAAGAGC TAAAAAAGCG GTCGATTTTG ATCCGCAAAA AAGTTTTTTT 
GTTGATGAAG ACGTACTTTT TGAGACACGA TCCGCAATAG AAAAAGGCGA TTTGGCAGAA 
AAACTTTGGA ATGAAAAAGT GGAAAAATTA AGCGATGATA AACGTAAAAT TTTAAATGAA 
CTGCAAAATC CTGATTTTTC AAAAATTGTT TTTCCTGATT TTAGCGGTCA AAAAATCGCA 
ACCAGAGAGA GTAACGGTAA AATTTTAAAT GCAATAAGTG AAGCAATTCC GGGATTTCTA 
GGTGGAAGTG CAGATCTTGC CGCATCAAAC AAAACCGCTC TTAAAAATTC AGGCGATTTT 
CCGTACGGAA AGAATATTCA CTATGGTATT CGAGAACACG CGATGGCTGC AATCGGCAAC 
GCATTCGCAA GATACGGTCT TTTCATACCG TTTTCCGCTA CATTTTTTAT TTTCAGCGAT 
TATATGAAAT CAGGTGTAAG ACTTGCCGCA CTTATGGGAT TACGTCATTA TTTTGTTTTT 
ACTCACGATA GTATCGGAGT CGGCGAAGAC GGTCCTACAC ATGAACCTAT AGAACAACTT 
GGCACATTTC GCTCAATGCC TGATTTTTAT ACATTTAGAC CGGCTGATGG AAATGAAAAC 
GTAGAGTGCT GGAAAATAGC GTTAAACAAC TCGAAACCTG CAGCTTTTGT GTGTTCAAGA 
CAAGGACTTG AAAGTCTGCC GAAAGCCGTT TTCGGAAGCG TAAAAAATGG AGCTTATCTG 
GTAAAAGAAA CAAAAGATGC AAAAATTACA CTGATTGCAA GCGGAAGCGA AGTGGAGCTT 
TGCTTGAAAG CGGCTGAAAT TTTAAAAAGC GAAAATATAA ATGCAAATGT TGTATCTACG 
CCTTGTTTCG AGCTTTTATG TGAGCAGAAT GAAGATTATA TAAATAAAAT TTTAAAAGGT 
AAAATTTTAG CCGTTGAGGC TGCAAGCGGT CTTGAATGGT ATAAATTCGC AGATGAAATT 
TTCGGTATGA AAACATTTGG TGCAAGCGGC AAAGCGAGCG ATCTTTTTAA ACATTTCGGA 
TTTACCGATA AAAATATCGC AGAAACTGCA AAAAAATTAA TGAAAAAGTA G 

 

Protein sequence

MNEKISNTIK FLSADMIQKA NSGHPGTPMG LSDVITVLMR HIRHNPKNPK WLNRDRLVFS 
GGHASALIYS YLYLTGYDLS LDDLKSFRQI YSKTPGHPEI TTPGIEIATG PLGQGIANAV 
GFAMAAKFAA NLLNEDKNKI IDHKVYCICG DGDLEEGISY EACSIAGNQN LDNLVIIYDS 
NNITIDGNTN ITWDEDVKVR FEAQGFEVAR IDGHNFDQIE FALNEVANKT KPYLIIVNTA 
IGKGALELEG SAKTHGSPLG EDLIARAKKA VDFDPQKSFF VDEDVLFETR SAIEKGDLAE 
KLWNEKVEKL SDDKRKILNE LQNPDFSKIV FPDFSGQKIA TRESNGKILN AISEAIPGFL 
GGSADLAASN KTALKNSGDF PYGKNIHYGI REHAMAAIGN AFARYGLFIP FSATFFIFSD 
YMKSGVRLAA LMGLRHYFVF THDSIGVGED GPTHEPIEQL GTFRSMPDFY TFRPADGNEN 
VECWKIALNN SKPAAFVCSR QGLESLPKAV FGSVKNGAYL VKETKDAKIT LIASGSEVEL 
CLKAAEILKS ENINANVVST PCFELLCEQN EDYINKILKG KILAVEAASG LEWYKFADEI 
FGMKTFGASG KASDLFKHFG FTDKNIAETA KKLMKK