Gene CHAB381_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0170 
Symbol 
ID5408691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp150762 
End bp152738 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content30% 
IMG OID640869884 
Productcmgd4 
Protein accessionYP_001405778 
Protein GI154149168 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3505] Type IV secretory pathway, VirD4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.035471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA AGTTAAATAA AGCTCAAATC ATATTTTTAT CTATTGTTGC TATTGTTATA 
TCTTATTTTT TAACAAGTGT TGTAATATTT GTATTAAATG ACGCCTTAAA ACTACTTCCA
AAAGTATGGA AGCCTGAATT TACATTTTTA GCCTTAATTA ATGGTTATCC AAAAGTATAT
GAAGCACTGA CCATTTCTCT ATTTTTAAGT TTTAGTGTAG TTTTCTTACT CCCCTTTATA
CCAAAAAAAG AAAAATTATA TGGAAATGCA AGATTTGCAA ACTCAGCAGA TATAAGAAAA
ATGGGGTTAT TTCCTAAAAA AGGAAAAGAT GGAAAAATAG ATAACAACGG AATTATTATA
GGTATGTATA ATAACCAGCT TTTGAGATTT GGTGGGCAAC AATTTGTAGC ACTTGGAGCT
CCAACAAGAA GCGGAAAAGG TGTTGGTATA GTTATACCAA ATTTGCTTGA TTATCCAAAT
TCTTGCGTTG TTCAAGATAT AAAATTAGAA TGTTTTGAAT ATACCAGTAA ATATAGAAAA
GAAATTCTAA AACAAGATAT ATTTTTATTC AACCCATATA GTTTTAAAAC TCATCGTTAT
AATCCACTTT TTTATATAGA TATGAAAGGT GAAAATGCCG ATGCTGAACT AAACGACTTT
GCAAATATTT TATATCCACT TAAAAATGAT GGCTCAGTAA CTGATTATTT TAATGGAAAA
GCAAAAGATC TTTTTATTGG GCTTTGCTAT ATGATGAATG ACCTGCTTGG GACTAGAAAA
GGTATAGCAT TTTTACAAAA ATATGAACTT GAATGCTCAT TTTCTTTATA TGGAATCTTA
AAATTGAGTG AAGGATTAAA TTTTGAAGTA GAAATAGCCG ATGGAGAGAT AAAAACAATA
TCAAATTTTG CAGATACTTA CAATACTTTA GTAGAAATGA AAATGGTATC TCCAAAGGCA
AAAGAAAGAA TTGATGCATT CTTTGAAATT AAAAGCGATA ATGAAAGAAG TTCAGCAATG
GGTAGTTTTA TATCCCCATT AGCAATATTT AGAGCTGATA ATATGAGACT AGCTACTTCT
GCAAATGACT TTGATTTTAG GGACTTAAGG CGTAAAAAAA TGACAATTTA TATTGGAATT
ACGCCTGATA AATTGGCTTC TGCAAAGCCT ATTTTGAATA TATTTTGGCA ACAGCTCATT
TTAATAAATG TTCAGCAAGG CTTACCACAA TCAAATAAAG AGCTAAAACA TCCTTGCCTT
CTTTTAATGG ATGAATTTAC AGCAAGTGGA TATTTGGCAA CTTATTCATC AGCTATATCA
TTTATGGCTG GATACGACTT AAGAAGTCTA ATAATATATC AAGCAGATTC TCAACTTACC
AACAACAAAC CAGAAGGATA TGGACAAGCA GAAGCTAATA CACTTCTTAA AAACCACGCT
TGTAGGATTT ATTATGCTAT GAAAGATGAT GATGCAAAAA GATTAAGTGA ATCTCTTGGC
ACAAAAACAG TTAAGCAAAG AAGCAGAAAT TTAGGTCAAG GCGGTGGAGG TAGTGAAAGT
GAAACAAGTA GAGCTTTAAT GCTTTCAAAA GAGATCGAGG AGATGCCGTT TGATACAGAA
ATTATCAAAA TAGAGGGCAA ACCACCGATT AAATGCAAAA AGGCTCTATA TTATTCAAAC
AAATATTTTA TGGATAAATT CAAAGAAGTA AGTCCTAGTT TAAAAAATAT AAAAGAAATT
CCAAATAGAA AATCATTAGA AAATGCAATT CAAAATGGTG AAACTTATAT AAAAATACCA
CTTCAAAATG AAGAAACACT ACAAAATTAT TTAAAAGAAA ATATAGAAAA AAGACTTAAT
GAATTGCCAA TAGAAGAAGA TGCTGAGATA GAAAATGCAT TAGACAATAT AAATATAGAA
GATGAGGAGT ATAACAGTGA TGAGTATGAA AATTTTGAAA CAAGGGGAAA TTTATGA
 
Protein sequence
MQDKLNKAQI IFLSIVAIVI SYFLTSVVIF VLNDALKLLP KVWKPEFTFL ALINGYPKVY 
EALTISLFLS FSVVFLLPFI PKKEKLYGNA RFANSADIRK MGLFPKKGKD GKIDNNGIII
GMYNNQLLRF GGQQFVALGA PTRSGKGVGI VIPNLLDYPN SCVVQDIKLE CFEYTSKYRK
EILKQDIFLF NPYSFKTHRY NPLFYIDMKG ENADAELNDF ANILYPLKND GSVTDYFNGK
AKDLFIGLCY MMNDLLGTRK GIAFLQKYEL ECSFSLYGIL KLSEGLNFEV EIADGEIKTI
SNFADTYNTL VEMKMVSPKA KERIDAFFEI KSDNERSSAM GSFISPLAIF RADNMRLATS
ANDFDFRDLR RKKMTIYIGI TPDKLASAKP ILNIFWQQLI LINVQQGLPQ SNKELKHPCL
LLMDEFTASG YLATYSSAIS FMAGYDLRSL IIYQADSQLT NNKPEGYGQA EANTLLKNHA
CRIYYAMKDD DAKRLSESLG TKTVKQRSRN LGQGGGGSES ETSRALMLSK EIEEMPFDTE
IIKIEGKPPI KCKKALYYSN KYFMDKFKEV SPSLKNIKEI PNRKSLENAI QNGETYIKIP
LQNEETLQNY LKENIEKRLN ELPIEEDAEI ENALDNINIE DEEYNSDEYE NFETRGNL