Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0170 |
Symbol | |
ID | 5408691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 150762 |
End bp | 152738 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640869884 |
Product | cmgd4 |
Protein accession | YP_001405778 |
Protein GI | 154149168 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.035471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATA AGTTAAATAA AGCTCAAATC ATATTTTTAT CTATTGTTGC TATTGTTATA TCTTATTTTT TAACAAGTGT TGTAATATTT GTATTAAATG ACGCCTTAAA ACTACTTCCA AAAGTATGGA AGCCTGAATT TACATTTTTA GCCTTAATTA ATGGTTATCC AAAAGTATAT GAAGCACTGA CCATTTCTCT ATTTTTAAGT TTTAGTGTAG TTTTCTTACT CCCCTTTATA CCAAAAAAAG AAAAATTATA TGGAAATGCA AGATTTGCAA ACTCAGCAGA TATAAGAAAA ATGGGGTTAT TTCCTAAAAA AGGAAAAGAT GGAAAAATAG ATAACAACGG AATTATTATA GGTATGTATA ATAACCAGCT TTTGAGATTT GGTGGGCAAC AATTTGTAGC ACTTGGAGCT CCAACAAGAA GCGGAAAAGG TGTTGGTATA GTTATACCAA ATTTGCTTGA TTATCCAAAT TCTTGCGTTG TTCAAGATAT AAAATTAGAA TGTTTTGAAT ATACCAGTAA ATATAGAAAA GAAATTCTAA AACAAGATAT ATTTTTATTC AACCCATATA GTTTTAAAAC TCATCGTTAT AATCCACTTT TTTATATAGA TATGAAAGGT GAAAATGCCG ATGCTGAACT AAACGACTTT GCAAATATTT TATATCCACT TAAAAATGAT GGCTCAGTAA CTGATTATTT TAATGGAAAA GCAAAAGATC TTTTTATTGG GCTTTGCTAT ATGATGAATG ACCTGCTTGG GACTAGAAAA GGTATAGCAT TTTTACAAAA ATATGAACTT GAATGCTCAT TTTCTTTATA TGGAATCTTA AAATTGAGTG AAGGATTAAA TTTTGAAGTA GAAATAGCCG ATGGAGAGAT AAAAACAATA TCAAATTTTG CAGATACTTA CAATACTTTA GTAGAAATGA AAATGGTATC TCCAAAGGCA AAAGAAAGAA TTGATGCATT CTTTGAAATT AAAAGCGATA ATGAAAGAAG TTCAGCAATG GGTAGTTTTA TATCCCCATT AGCAATATTT AGAGCTGATA ATATGAGACT AGCTACTTCT GCAAATGACT TTGATTTTAG GGACTTAAGG CGTAAAAAAA TGACAATTTA TATTGGAATT ACGCCTGATA AATTGGCTTC TGCAAAGCCT ATTTTGAATA TATTTTGGCA ACAGCTCATT TTAATAAATG TTCAGCAAGG CTTACCACAA TCAAATAAAG AGCTAAAACA TCCTTGCCTT CTTTTAATGG ATGAATTTAC AGCAAGTGGA TATTTGGCAA CTTATTCATC AGCTATATCA TTTATGGCTG GATACGACTT AAGAAGTCTA ATAATATATC AAGCAGATTC TCAACTTACC AACAACAAAC CAGAAGGATA TGGACAAGCA GAAGCTAATA CACTTCTTAA AAACCACGCT TGTAGGATTT ATTATGCTAT GAAAGATGAT GATGCAAAAA GATTAAGTGA ATCTCTTGGC ACAAAAACAG TTAAGCAAAG AAGCAGAAAT TTAGGTCAAG GCGGTGGAGG TAGTGAAAGT GAAACAAGTA GAGCTTTAAT GCTTTCAAAA GAGATCGAGG AGATGCCGTT TGATACAGAA ATTATCAAAA TAGAGGGCAA ACCACCGATT AAATGCAAAA AGGCTCTATA TTATTCAAAC AAATATTTTA TGGATAAATT CAAAGAAGTA AGTCCTAGTT TAAAAAATAT AAAAGAAATT CCAAATAGAA AATCATTAGA AAATGCAATT CAAAATGGTG AAACTTATAT AAAAATACCA CTTCAAAATG AAGAAACACT ACAAAATTAT TTAAAAGAAA ATATAGAAAA AAGACTTAAT GAATTGCCAA TAGAAGAAGA TGCTGAGATA GAAAATGCAT TAGACAATAT AAATATAGAA GATGAGGAGT ATAACAGTGA TGAGTATGAA AATTTTGAAA CAAGGGGAAA TTTATGA
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Protein sequence | MQDKLNKAQI IFLSIVAIVI SYFLTSVVIF VLNDALKLLP KVWKPEFTFL ALINGYPKVY EALTISLFLS FSVVFLLPFI PKKEKLYGNA RFANSADIRK MGLFPKKGKD GKIDNNGIII GMYNNQLLRF GGQQFVALGA PTRSGKGVGI VIPNLLDYPN SCVVQDIKLE CFEYTSKYRK EILKQDIFLF NPYSFKTHRY NPLFYIDMKG ENADAELNDF ANILYPLKND GSVTDYFNGK AKDLFIGLCY MMNDLLGTRK GIAFLQKYEL ECSFSLYGIL KLSEGLNFEV EIADGEIKTI SNFADTYNTL VEMKMVSPKA KERIDAFFEI KSDNERSSAM GSFISPLAIF RADNMRLATS ANDFDFRDLR RKKMTIYIGI TPDKLASAKP ILNIFWQQLI LINVQQGLPQ SNKELKHPCL LLMDEFTASG YLATYSSAIS FMAGYDLRSL IIYQADSQLT NNKPEGYGQA EANTLLKNHA CRIYYAMKDD DAKRLSESLG TKTVKQRSRN LGQGGGGSES ETSRALMLSK EIEEMPFDTE IIKIEGKPPI KCKKALYYSN KYFMDKFKEV SPSLKNIKEI PNRKSLENAI QNGETYIKIP LQNEETLQNY LKENIEKRLN ELPIEEDAEI ENALDNINIE DEEYNSDEYE NFETRGNL
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