Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0163 |
Symbol | |
ID | 5408664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 143944 |
End bp | 144381 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 640869877 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_001405771 |
Protein GI | 154149246 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0042056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATTTCTTTT TTTATTGGTA GTAAATTTAG GAATTTGCAG TGAATTTAAT CATCTTTTTA TAAAACACGG AAAATTAAAC AATATTTCAC CACTGCTTTT ATATGGAATT GCAAAAACAG AAAGCAGTTT AAATCCTAAT CAAGTAGCAA GAAATGACAA CGGAAGTTAT GATATAGGAA TTATGCAAAT TAATTCTATT CATTTGCCCG AGTTAAAATC TATGGGTTAT AAAGAAAAAG ATTTATTTAA CCCTGATATT AACATTGGAT TTGGAGCAAT TGTTTTGAAA AGATGTATCA ATAAGTGGGG ACTAAACTAT AAAGCTTTAA ATTGCTATAA CGGAAAAGTA AATAACAACA CTTATAACAT AAAAGTTGTT TCAAATATTG CCAATTACAA TAAAAATTTT AATCAAATTA TAAAATAA
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Protein sequence | MKKLFLFLLV VNLGICSEFN HLFIKHGKLN NISPLLLYGI AKTESSLNPN QVARNDNGSY DIGIMQINSI HLPELKSMGY KEKDLFNPDI NIGFGAIVLK RCINKWGLNY KALNCYNGKV NNNTYNIKVV SNIANYNKNF NQIIK
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