Gene CHAB381_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0163 
Symbol 
ID5408664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp143944 
End bp144381 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content25% 
IMG OID640869877 
Productlytic transglycosylase, catalytic 
Protein accessionYP_001405771 
Protein GI154149246 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0042056 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TATTTCTTTT TTTATTGGTA GTAAATTTAG GAATTTGCAG TGAATTTAAT 
CATCTTTTTA TAAAACACGG AAAATTAAAC AATATTTCAC CACTGCTTTT ATATGGAATT
GCAAAAACAG AAAGCAGTTT AAATCCTAAT CAAGTAGCAA GAAATGACAA CGGAAGTTAT
GATATAGGAA TTATGCAAAT TAATTCTATT CATTTGCCCG AGTTAAAATC TATGGGTTAT
AAAGAAAAAG ATTTATTTAA CCCTGATATT AACATTGGAT TTGGAGCAAT TGTTTTGAAA
AGATGTATCA ATAAGTGGGG ACTAAACTAT AAAGCTTTAA ATTGCTATAA CGGAAAAGTA
AATAACAACA CTTATAACAT AAAAGTTGTT TCAAATATTG CCAATTACAA TAAAAATTTT
AATCAAATTA TAAAATAA
 
Protein sequence
MKKLFLFLLV VNLGICSEFN HLFIKHGKLN NISPLLLYGI AKTESSLNPN QVARNDNGSY 
DIGIMQINSI HLPELKSMGY KEKDLFNPDI NIGFGAIVLK RCINKWGLNY KALNCYNGKV
NNNTYNIKVV SNIANYNKNF NQIIK