Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0133 |
Symbol | recJ |
ID | 5408201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 113975 |
End bp | 115549 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640869852 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001405746 |
Protein GI | 154148993 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.556564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGGTA AAAAAGAGTT AAAAGAAATT TTATCGGCTC GCTTTAAAAA TGACAAGCAT ACTAAAATTT CGCAAATTCC ACTTCCAAGC GATCTTAAAG ACACTTATAA AGCCGCAAAT CGCATAAAAG AAGCTATAAA CAATAATGAA AAAATAGCGA TTATCGGCGA TTATGATGTG GACGGCGTCG TAAGCAGCGT AATTATGAAT GATTTTTTAA GCGAGCTCGG TGCAAATTTC ATAGTTAAAA TTCCGAATCG CTTTACTGAT GGATACGGTC TTAATCCGCA AATGCTTAAT GAGCTTGACG GAATAAATCT TATTATCACG GTGGATAATG GAATTTCGGC AAACGATGCA GCTGAAATCT GCTACAAAAA AAGAATAGAT CTTATAATCA CGGATCACCA TATGCCGCCG CCGACTCTTC CAAAAGCTTA TGCGATAATA AATCCCAAAC AAAATGACTG CACATTTCCG AATGTAGAAA TTTGCGGGGC ACAGGTAGCG TGGTATTTAA TCGGTGCTTT AAAAGAAATT TGCAATGTAA ATTATGATAT GTCAGAGCTC CTGGATCTTT TAATAATTGC TATAATTGCT GATATGATGG AACTTCGAGA TTTAAATCGC GCACTTTTAA AATTCGGCAT AAAAAAGCTT AACAACTCGA AGCGCGCCTG CTTTAAAGCC ATAAGAGAGC ATTATTTTAA GAAAAAATTT GAGTTTGACG ACATAAGTTA CACAATAGCT CCACTTATAA ACTCTACAGG CAGAATGGAC GATGCAAGTT TGTCTTATAA ATTTTTGTGC TCGAAAAATA TAAAAGAAGC GAATTACTAT CTTGATCAAA TTACAAAAAT AAACAGATCG CGCAAAGAAG AAGAACACAT CCTTTATAAA CAAAGCTTGC AAAATGTGGA TGAAAACGAC CATATATTAG TAACTTGGGG CGAAAATTGG CATGAAGGCG TAATAGGAAT AGTTGCCAGC AGACTTACAA AAAATTATAA AAAACCGGCA ATTGTGTTTA GTATCGATAA GGACGCAAAT CGTGCAAAAG GAAGCGCCAG AAGCATAGGA AAGTTCGATA TTTTAGAACT TATAGCTTCA CAAAAAGAAC TTTTGGAAGG TTTTGGCGGG CATAAAGGCG CGGCAGGACT TGTGATAAAT CCACAAAATT TAAGTGAGTT TAAAAGGAAA ATAAACAATG CCTGCTTCAA TGTAAATCAT GGAAATTTTA CATTTTCCGA TGAAATTTTG GGCGAGCTCA ATTTAAGCGA ACTTGATAAC GAAATGCTTA AAATTTTGGA ATTTTACGAA CCATACGGAC AAAAAAATCC GCGTCCGCTT TTTAAATTGG AAAATGCAAT TGTAAAAAAC ATAAAAATCA TCGGAAAAGA GAAAAATCAC GCTAAAATCG CAATCGAAAA AAATAACGCA ATAAGAGAAG GACTGTTTTT TAATTTCAAC TTTTTACCAC AAGTTGGAGA TAGTTTTTCA TTTATCGCAT CAATCGGCAA AAATTCGTTT CGCGGAGAAA TTTCACCCGA ACTGATTATA AAAGAAATTT TGTGA
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Protein sequence | MVGKKELKEI LSARFKNDKH TKISQIPLPS DLKDTYKAAN RIKEAINNNE KIAIIGDYDV DGVVSSVIMN DFLSELGANF IVKIPNRFTD GYGLNPQMLN ELDGINLIIT VDNGISANDA AEICYKKRID LIITDHHMPP PTLPKAYAII NPKQNDCTFP NVEICGAQVA WYLIGALKEI CNVNYDMSEL LDLLIIAIIA DMMELRDLNR ALLKFGIKKL NNSKRACFKA IREHYFKKKF EFDDISYTIA PLINSTGRMD DASLSYKFLC SKNIKEANYY LDQITKINRS RKEEEHILYK QSLQNVDEND HILVTWGENW HEGVIGIVAS RLTKNYKKPA IVFSIDKDAN RAKGSARSIG KFDILELIAS QKELLEGFGG HKGAAGLVIN PQNLSEFKRK INNACFNVNH GNFTFSDEIL GELNLSELDN EMLKILEFYE PYGQKNPRPL FKLENAIVKN IKIIGKEKNH AKIAIEKNNA IREGLFFNFN FLPQVGDSFS FIASIGKNSF RGEISPELII KEIL
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