Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0103 |
Symbol | secY |
ID | 5408710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 86384 |
End bp | 87649 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640869822 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001405716 |
Protein GI | 154149113 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA CATTGATGAC AAAAATTCTA ATTACTTTGG GATTTTTGTT CGCTTATAGA TTGCTTGCTT ATGTTCCTGT TCCAGGTGTC AATGTAGATG TAATCAAAGA ATTTTTTGAT TCTAATGCAG GAAATGCACT TGGAATGTTT AATATGTTTA GCGGAAAGGC TGCCGAGCGA CTTAGTGTAA TTTCGCTTGG CATTATGCCT TATATTACCG CTTCGATTAT TATGGAACTT TTGGCGGCAA CTTTTCCAAA TTTAGGTAAA CTGAAAAAAG AGCGTGACGG TATGCAAAAA TATATGCAAA TAATTCGTTA CACAACTATT GGAATTACAG TTGTTCAAGC AATCGGTGTA AGCATTGGTT TACAAGGATT AACAGGTAGA ACTGGTGCTT CTGCTATTAT GACGGAAAAT ACAAATGAGT TTATATTCAT TTCATGTATT TCTATGCTTG TAGGAACAAT GCTTTTAATG TGGATCGGCG AGCAAATCAC TCAAAGAGGA ATAGGGCAAG GTATAAGTTT AATAATTTTT GCAGGTATTG TAAGCGGAAT TCCAAGTGCA ATCGGCGGAA CCGTAAATTT ATTAAATACC AGCGAAATGA ATTTTATAGT TTTAGCTTTT GTTATACTTA TAATTTTAGT GACAATCGGT GTTATTATTT ATGTGGAAAT GGCTGAACGT CGTGTGCCTA TTTCATATTC CCGCAAGATT ATTATGCAAA ATCAAAACAA AAGAATAATG AACTACATTC CTATCAAAAT CAATCTTAGC GGTGTTATTC CGCCTATTTT TGCAAGTGCG ATTTTGATGT TTCCAGGAAC TATCCTACAA ACCAGCACAA ATCCGTTTAT TCAAAAAATA AATGATTTTT TAAGTCCACA AGGATATTTT TTCAATTTTA TACAATTTTT ATTAGTTGTA TTTTTTGCGT ATTTTTATGC TTCAATCGCA TTCAACAGCA AAGATATAAG TGAAAATCTT AAAAAGCAAG GTGGATTTAT TCCAGGAGTT CGTCCAGGCG AACATACGTC TACATTTTTA AATGATGTTG CAAGTCGTTT AACATTTTGG GGCTCAATCT ATTTAGGTAT GGTTACCGTT GTTCCTTGGC TACTTACAAA ATTTTTAGGC GTGCCTTTTT ATTTCGGTGG CACATCTGTT CTTATCGTTG TTTCTGTTGC ACTTGATACG ATGAGACGAA TTGAAGCTCA AATTTATATG AACAAATATA AAACTTTGAG TGCGATTGGT TTATAA
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Protein sequence | MNKTLMTKIL ITLGFLFAYR LLAYVPVPGV NVDVIKEFFD SNAGNALGMF NMFSGKAAER LSVISLGIMP YITASIIMEL LAATFPNLGK LKKERDGMQK YMQIIRYTTI GITVVQAIGV SIGLQGLTGR TGASAIMTEN TNEFIFISCI SMLVGTMLLM WIGEQITQRG IGQGISLIIF AGIVSGIPSA IGGTVNLLNT SEMNFIVLAF VILIILVTIG VIIYVEMAER RVPISYSRKI IMQNQNKRIM NYIPIKINLS GVIPPIFASA ILMFPGTILQ TSTNPFIQKI NDFLSPQGYF FNFIQFLLVV FFAYFYASIA FNSKDISENL KKQGGFIPGV RPGEHTSTFL NDVASRLTFW GSIYLGMVTV VPWLLTKFLG VPFYFGGTSV LIVVSVALDT MRRIEAQIYM NKYKTLSAIG L
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