Gene CHAB381_0085 details

Gene Information

• Locus tag: CHAB381_0085
• Symbol: rplD
• ID: 5408923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 78896
• End bp: 79510
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640869804
• Product: 50S ribosomal protein L4
• Protein accession: YP_001405698
• Protein GI: 154148894
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000177628
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG TAAAAGTGCT TAATGAAAAA TTAGAAAAAG CAAGCGAGCT TGAACTTCCT 
GCAAATTTTG CCGATGTAAA TCCGCATAAT TTATATTTGT ATGTCAAATC TTATCTTGCT 
TCGCTTCGTG CAAATACTGC AAATACAAAA GGAAGATCTG AGGTAAGCGG TGGCGGCAAA 
AAACCATGGC GTCAAAAAGG TAGAGGCGGA GCTAGAGCAG GTTCAACCAG AACAAACGTT 
TGGGTTGGCG GTGCTGTTGC TTTTGGACCT ACAAATAATA GAAATTATTT TCAAAAAGTA 
AATAAAAAAC AAAAACGTCT AGCATTGGAA TTTGCGTTAA ATGAAAAAGC GCAAAACGAT 
AAAATTTTTG CAGTTGACAG TCTTGAAATT TCAAGCGGAA AAACAAAAGA TGCTGCAAAA 
TTTATAAAAA ATTTGGGTGT TAGAGATGCT TTGATAGTTA AAAACGAGCT GGATAGTGCA 
ACACTTCTTG CTTATAGAAA TCTAAACAAC TGCTATGTTA TAGATATAAA TGAGCTAAAT 
GCATATTTGG TTGCAGTTTA TAGTGCTGTT ATCATCGAAA CATCGGCACT ACAATCAATA 
GTGAAAGAGG GCTAA 

 

Protein sequence

MSKVKVLNEK LEKASELELP ANFADVNPHN LYLYVKSYLA SLRANTANTK GRSEVSGGGK 
KPWRQKGRGG ARAGSTRTNV WVGGAVAFGP TNNRNYFQKV NKKQKRLALE FALNEKAQND 
KIFAVDSLEI SSGKTKDAAK FIKNLGVRDA LIVKNELDSA TLLAYRNLNN CYVIDINELN 
AYLVAVYSAV IIETSALQSI VKEG