Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0018 |
Symbol | def |
ID | 5408991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 18673 |
End bp | 19188 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640869741 |
Product | peptide deformylase |
Protein accession | YP_001405640 |
Protein GI | 154149172 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTGG AAATTTTGAC ATATCCGAAT AAAAAACTCT ATCAAAAATC AAAAAAAGTA GAAAAATTTG ATGACGAACT TGGTAAATTT TTAGATGATA TGTACGAAAC TATGATTTCA AAAAAAGGAA TAGGACTTGC TGCAATTCAG GTCGGTCGTC CTATTCGCGC AATTGTAATA AATTTAGTCG ATGAAAACGA TGAACAAAAA AAAGAAAATT TACTTGAAAT TATAAATCCT GAAATTTTAA CTCAAGAAGG TGAGATAATA TATCAGGAAG GCTGTCTATC GGTTCCAGGA TACTATGAAG ATGTAAAAAG AGCCGAATTT GTAAAACTGG GATTTCAAAA CCGTTTCGGT GAAACTAAAG AAATGGAAGT TCAAGAGCTT TTAGCTGTTT GTATCCAGCA CGAAATCGAT CATCTTGACG GGCATCTGTT TATAGAAAAA ATCGGCTATA ACAAACGAAA AAAATTTGAT AAAGAATTTA AAAAACATTT AAAAGAAAAA AAATGA
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Protein sequence | MILEILTYPN KKLYQKSKKV EKFDDELGKF LDDMYETMIS KKGIGLAAIQ VGRPIRAIVI NLVDENDEQK KENLLEIINP EILTQEGEII YQEGCLSVPG YYEDVKRAEF VKLGFQNRFG ETKEMEVQEL LAVCIQHEID HLDGHLFIEK IGYNKRKKFD KEFKKHLKEK K
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