Gene CHAB381_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0010 
Symbol 
ID5409358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp9309 
End bp10601 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content33% 
IMG OID640869733 
Productmultidrug-efflux transporter 
Protein accessionYP_001405632 
Protein GI154148436 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAA GTGTGTTACC ACTATCTTTT ATTATCGCAA CAAGATTTTT TGGACTTTTT 
ATAGTTTTAC CGGTTCTTAG TTTATATGCT TTAAATTTAA AAGGTGCGAG CGAAAATTTA
ACAGGTCTGG TTATCGGTAT TTACGCAGTT ATGCAAATGA TTTTTCAAGT GCCTTTCGGT
GCGCTGAGTG ATAGAATAGG GCGTAAAAAT GCTCTTTGCT TAGGACTTAT TGTTTTTATA
ATCGGTTCTT TTATCTGCGC TTTCAGTAAT GATATTTTTA CGATGATTAT AGGTAGAGCT
CTTCAGGGAA GCGGCGCTGT AGGAGCTGTG GCGACCGCTT TGATAAGCGA TTTTATAGTT
GAAGAAAAAC GCAGCAAAGC AATGGCGATA ATGGGCGGGA TGATTGCACT CAGTTTTGCC
GTTTCAATGA TATTAAGTCC AATTTTGAGT GCAAAATTCG GGATTTCAAG TTTATTTGAA
TTGAGTGCTT ATCTTACGAT ATTTTGCCTT ATTTTGCTTT ATATAATTGT TCCAAAAGAG
CCTAAAATAA AATCTTTAAA GCAGAAAACA CCTTTTTTAG AAATTTTAAA AGATAAAGAT
TTAACTCTAA TGAATCTTAC TAGTTTTTTG CAAAAAATGT TTATGACAAT GGCTTTTGTA
ATAATTCCGA TAGTGCTTGT AAAAGATTTT AATTTTGATA AGAACGAACT TTATAAAATT
TACGGTATAG CTACTTTTTT TGGATTTTTT GCTATGGGTT TTTCTGGTGC TATGGGCGAA
AGACGTGGGC TTGCTAAAGG AATTTTACTT GCAGGAATTT TATTTTTTAT CGTCAGTTTT
ATAATTTTCG CCGTTTCTCA TTCGGTTCTT AGCTTTTCAG TCGGAGTTGT GATTTTTTTT
ATCGGATTTA ATATGCACGA ACCTATAATG CAATCTGTCG CGTCAAAATT TGCCAAAATT
TCACAACGCG GTGAAGTTCT TGGAATTTTT AATTCCGCAG GATATTTCGG CAGCTTTATC
GGTGCCGTTT CGGGCGGAAT TATTGTAGGT TTTCATATTA GCATTTTGGC GATTTTTGTA
GCGATTTTAG GCATTATCTG GTTTTGGCTT TTGCTAAAAC TTACAAATCC GAATGATTTT
AAAAATTTAT ATCTTGATAA ATTCAAAGTG CGAAATTTTA GTGTTTTAGG TAGTATAAAC
GGAGTTGTAG AATTTTATGA AACAAATGAA AATTTTGTGA TAAAATACAA CCGAAAAGTA
ATCAGTGAAA GGCAAATTTT AGAAATTTTA TGA
 
Protein sequence
MFRSVLPLSF IIATRFFGLF IVLPVLSLYA LNLKGASENL TGLVIGIYAV MQMIFQVPFG 
ALSDRIGRKN ALCLGLIVFI IGSFICAFSN DIFTMIIGRA LQGSGAVGAV ATALISDFIV
EEKRSKAMAI MGGMIALSFA VSMILSPILS AKFGISSLFE LSAYLTIFCL ILLYIIVPKE
PKIKSLKQKT PFLEILKDKD LTLMNLTSFL QKMFMTMAFV IIPIVLVKDF NFDKNELYKI
YGIATFFGFF AMGFSGAMGE RRGLAKGILL AGILFFIVSF IIFAVSHSVL SFSVGVVIFF
IGFNMHEPIM QSVASKFAKI SQRGEVLGIF NSAGYFGSFI GAVSGGIIVG FHISILAIFV
AILGIIWFWL LLKLTNPNDF KNLYLDKFKV RNFSVLGSIN GVVEFYETNE NFVIKYNRKV
ISERQILEIL