Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0010 |
Symbol | |
ID | 5409358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 9309 |
End bp | 10601 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640869733 |
Product | multidrug-efflux transporter |
Protein accession | YP_001405632 |
Protein GI | 154148436 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGAA GTGTGTTACC ACTATCTTTT ATTATCGCAA CAAGATTTTT TGGACTTTTT ATAGTTTTAC CGGTTCTTAG TTTATATGCT TTAAATTTAA AAGGTGCGAG CGAAAATTTA ACAGGTCTGG TTATCGGTAT TTACGCAGTT ATGCAAATGA TTTTTCAAGT GCCTTTCGGT GCGCTGAGTG ATAGAATAGG GCGTAAAAAT GCTCTTTGCT TAGGACTTAT TGTTTTTATA ATCGGTTCTT TTATCTGCGC TTTCAGTAAT GATATTTTTA CGATGATTAT AGGTAGAGCT CTTCAGGGAA GCGGCGCTGT AGGAGCTGTG GCGACCGCTT TGATAAGCGA TTTTATAGTT GAAGAAAAAC GCAGCAAAGC AATGGCGATA ATGGGCGGGA TGATTGCACT CAGTTTTGCC GTTTCAATGA TATTAAGTCC AATTTTGAGT GCAAAATTCG GGATTTCAAG TTTATTTGAA TTGAGTGCTT ATCTTACGAT ATTTTGCCTT ATTTTGCTTT ATATAATTGT TCCAAAAGAG CCTAAAATAA AATCTTTAAA GCAGAAAACA CCTTTTTTAG AAATTTTAAA AGATAAAGAT TTAACTCTAA TGAATCTTAC TAGTTTTTTG CAAAAAATGT TTATGACAAT GGCTTTTGTA ATAATTCCGA TAGTGCTTGT AAAAGATTTT AATTTTGATA AGAACGAACT TTATAAAATT TACGGTATAG CTACTTTTTT TGGATTTTTT GCTATGGGTT TTTCTGGTGC TATGGGCGAA AGACGTGGGC TTGCTAAAGG AATTTTACTT GCAGGAATTT TATTTTTTAT CGTCAGTTTT ATAATTTTCG CCGTTTCTCA TTCGGTTCTT AGCTTTTCAG TCGGAGTTGT GATTTTTTTT ATCGGATTTA ATATGCACGA ACCTATAATG CAATCTGTCG CGTCAAAATT TGCCAAAATT TCACAACGCG GTGAAGTTCT TGGAATTTTT AATTCCGCAG GATATTTCGG CAGCTTTATC GGTGCCGTTT CGGGCGGAAT TATTGTAGGT TTTCATATTA GCATTTTGGC GATTTTTGTA GCGATTTTAG GCATTATCTG GTTTTGGCTT TTGCTAAAAC TTACAAATCC GAATGATTTT AAAAATTTAT ATCTTGATAA ATTCAAAGTG CGAAATTTTA GTGTTTTAGG TAGTATAAAC GGAGTTGTAG AATTTTATGA AACAAATGAA AATTTTGTGA TAAAATACAA CCGAAAAGTA ATCAGTGAAA GGCAAATTTT AGAAATTTTA TGA
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Protein sequence | MFRSVLPLSF IIATRFFGLF IVLPVLSLYA LNLKGASENL TGLVIGIYAV MQMIFQVPFG ALSDRIGRKN ALCLGLIVFI IGSFICAFSN DIFTMIIGRA LQGSGAVGAV ATALISDFIV EEKRSKAMAI MGGMIALSFA VSMILSPILS AKFGISSLFE LSAYLTIFCL ILLYIIVPKE PKIKSLKQKT PFLEILKDKD LTLMNLTSFL QKMFMTMAFV IIPIVLVKDF NFDKNELYKI YGIATFFGFF AMGFSGAMGE RRGLAKGILL AGILFFIVSF IIFAVSHSVL SFSVGVVIFF IGFNMHEPIM QSVASKFAKI SQRGEVLGIF NSAGYFGSFI GAVSGGIIVG FHISILAIFV AILGIIWFWL LLKLTNPNDF KNLYLDKFKV RNFSVLGSIN GVVEFYETNE NFVIKYNRKV ISERQILEIL
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