Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2458 |
Symbol | |
ID | 5410542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2539536 |
End bp | 2541707 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640869715 |
Product | ski2-like helicase |
Protein accession | YP_001405615 |
Protein GI | 154151997 |
COG category | [R] General function prediction only |
COG ID | [COG1204] Superfamily II helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCC AGGATCTCGC AATACCCGAA CCCCTCAGGC AACAGTACCT GGGGCTAGGG ATCCGCGAGC TCTATCCTCC GCAGGCAGCT TGTGTCGAGA GAGGCCTCTT GGACGGGAAA AACCTCCTTG TCGCGATCCC GACCGCGAGC GGCAAGACGC TGATTGCAGA GATGGCAATG CATCGCCACA TCGCTAATGG CGGAAAGTGC CTGTATATTG TTCCCTTAAA GGCCCTCGCT TCGGAAAAAT ACGAAGAATT CGGGAACAAA GGGGTAAAGG TCGGCCTCTC GACCGGAGAC CTTGATCGAC GCGACGATGC CCTCGGGAAA AACGATATTA TTGTTGCAAC AAGCGAGAAG GTGGACTCGC TCCTCCGAAA CGGCGCCCGC TGGATCCCGG ATATCACGCT TGTTGTCATA GACGAGATAC ACTTAATCGA CTCCCCGGAC CGGGGGCCAA CACTCGAGAT GGTGATCGCA AAGATGCGGT CAAAGAACCC GGGCATGCAG CTCATCGGCC TCTCGGCAAC GATAGGAAAC CCAAAGGTGC TTGCCGGGTG GCTTGACGCG GAACTCGTCA CAAGCTCCTG GCGGCCGGTG GACCTCCGGC AGGGCGTCTT CTACGACAAC CGGATCCAGT TTGCGGAAAG GATGCGGCCC GTAAAGCAGG TCTCGAAAAA CTACGATGAC CTCAACCTCT GCCTGGATAC CATCGCAGAA GGGGGGCAGT GCCTGGTCTT TGTCTCTTCG CGAAGGAACG CGGAGGCCTT TGCAAAGAGG GCAGCCGGGG CGATCAAAAG TGAAGATGCA GCACTTGCCG CATGCGCCGA ACGATTGCTC GAAGGCACAC CGACCGAAAT GGTAAAGACG CTTGCCGCAT GCGTTGCAAA AGGGGCGGCC TTCCACCATG CGGGTCTGAG CCGGAAGGAG CGGTCAATCG TGGAAGAGGC GTTCCGTAAG AACCTGCTCA AGTGCATCTC CTCGACCCCG ACGCTCGCCG CCGGCCTCAA CCTGCCCGCC CGCCGGGTGA TTATCCGGGA CTACCTCCGG TTTTCCGCCG GCGAAGGTAT GCAGCCGATC CCGGTAAGCG AGTACCGCCA GATGGCAGGA AGGGCCGGCC GGCCCCGTCT CGATCCGTAC GGTGAGGCCG TGCTGATAGC AAAAGAAGCC GAGCAGGTGC CGGAGCTCTT TGAGGTCTAC ATCGAGGCAG AGGCAGAGGA TGTTCATTCA CGGATTGCAG AACCGACCGC GCTTTACACT CATGTCCTCT CTCTTGTAGC CTCGGGATTT GCCGGAACCC GGGGAGAACT TACCGAATTC ATGAACCGCT CGTTCTATGT CCACGAGCAT AAGCAGGGCC GGCTTATCCA CCGGGCAATC GATGAGGCGC TCCAGTTCCT GATCACGGCA GAGATGGTTG TTGAAGTGGG CGAGCACATC GGGGCAACGG AACTCGGGAC CCTTGTCTCC CGGATGTACA TCGATCCAAG GAGCGCCTTT GCCATTGTCA CAACCCTGCG GGAGCAGGAG AAGTACGCGG ATCTCGGCCT TATCCAGCTC ATCTGTACCA CCCCGGATAT GCCGACTCTG TACGCAAAGA ATGCCGATCT CCCGGCGCTC TCCCGGATGC TTGAAGTACG GGGGGCAGAT ATCTGGCTCC CGCCCCCACT GGATGACGAC GCAGCCGAGA CCTACTACCG GGCGGTAAAG ACCGCAATGC TCCTTTCTGA CTGGACCGAT GAGCTCTCCG AGGAGAAGAT CTGCGAGCGG TACGGCGTGG GGCCCGGGGA TGTGTTCGGG ATGGTCGAGA ACATCAACTG GCTGCTCCAC GCAACAAGTC AGCTGGCCCG GATGTTTGTC CCGAAATTTT ACGGGCAGAT CGCGGATTGC GAGATCTGCA TGAAGAATGG AATACGGCGC GAACTCCTCC CGCTCGTCCG GCTGCGTGGC ATCGGACGCG TCCGTGCCCG GCGGCTCTTC AACAACGGCA TTACCTCACC GGAAGAATTA TCCCGGCACA AAAAAGAGGA TTTGGTGAAG ATCCTTGGTT CAGGCATTGC TGAGCAGGTA CTGGAACAAC TGCATCCAAG CAAAGACACC GGGAAAAAAG AGCCTCCAAG CGGAGATAAG AATACAAATC CAGGCCAGTC GACTCTGTTT CATTTCGGGT GA
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Protein sequence | MQIQDLAIPE PLRQQYLGLG IRELYPPQAA CVERGLLDGK NLLVAIPTAS GKTLIAEMAM HRHIANGGKC LYIVPLKALA SEKYEEFGNK GVKVGLSTGD LDRRDDALGK NDIIVATSEK VDSLLRNGAR WIPDITLVVI DEIHLIDSPD RGPTLEMVIA KMRSKNPGMQ LIGLSATIGN PKVLAGWLDA ELVTSSWRPV DLRQGVFYDN RIQFAERMRP VKQVSKNYDD LNLCLDTIAE GGQCLVFVSS RRNAEAFAKR AAGAIKSEDA ALAACAERLL EGTPTEMVKT LAACVAKGAA FHHAGLSRKE RSIVEEAFRK NLLKCISSTP TLAAGLNLPA RRVIIRDYLR FSAGEGMQPI PVSEYRQMAG RAGRPRLDPY GEAVLIAKEA EQVPELFEVY IEAEAEDVHS RIAEPTALYT HVLSLVASGF AGTRGELTEF MNRSFYVHEH KQGRLIHRAI DEALQFLITA EMVVEVGEHI GATELGTLVS RMYIDPRSAF AIVTTLREQE KYADLGLIQL ICTTPDMPTL YAKNADLPAL SRMLEVRGAD IWLPPPLDDD AAETYYRAVK TAMLLSDWTD ELSEEKICER YGVGPGDVFG MVENINWLLH ATSQLARMFV PKFYGQIADC EICMKNGIRR ELLPLVRLRG IGRVRARRLF NNGITSPEEL SRHKKEDLVK ILGSGIAEQV LEQLHPSKDT GKKEPPSGDK NTNPGQSTLF HFG
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