Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2457 |
Symbol | |
ID | 5410541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2538799 |
End bp | 2539344 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640869714 |
Product | putative RNA-processing protein |
Protein accession | YP_001405614 |
Protein GI | 154151996 |
COG category | [R] General function prediction only |
COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAGG AATTAAAGAT TGCAACAAGC AGGGTAGGCG TCCTGATTGG AAAGGGCGGC TCGACAAAAA AAGAGCTCGA GGAAAAGACC CACACAACGA TCTCCATCGA CAGCAAGGAG GGGCTTGTCA AAGTCGAGGC TGCCGAGGAA AATGCAATCC CGCTCCTGCG GGCCGTAGAG ATTATAAACG CACTCAATGC CGGTTTCTCC CCCCAGCGCG CTTTTGAAAT GATCGAAGAC GAGGATCTCC TTCTCGATAT CATCGATCTT TCGCGGGTAG CGGACAACCC CCGGCAGCTC GACCGGCTTC GGGGCCGGAT CATCGGAAAG GACGGACGCG CCCGCGAGCA GATCGAGAAC ATGACTGACG TTGACATCTC GGTCTTCGGC CACACCGTCG GCCTGATCGG GTACCCCGAG CAGATGAAGA TAGCGAGGGC GGCCATCGAC ATGCTCATCG AGGGTGTCCC CCACGAGAAC GTCTTTGCAT TCCTCGACAA GAAGAAGAAA GAGGCCAAGC AGGACATGAT CAGTTACTAT TACTGA
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Protein sequence | MIQELKIATS RVGVLIGKGG STKKELEEKT HTTISIDSKE GLVKVEAAEE NAIPLLRAVE IINALNAGFS PQRAFEMIED EDLLLDIIDL SRVADNPRQL DRLRGRIIGK DGRAREQIEN MTDVDISVFG HTVGLIGYPE QMKIARAAID MLIEGVPHEN VFAFLDKKKK EAKQDMISYY Y
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