Gene Mboo_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2457 
Symbol 
ID5410541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2538799 
End bp2539344 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content55% 
IMG OID640869714 
Productputative RNA-processing protein 
Protein accessionYP_001405614 
Protein GI154151996 
COG category[R] General function prediction only 
COG ID[COG1094] Predicted RNA-binding protein (contains KH domains) 
TIGRFAM ID[TIGR03665] arCOG04150 universal archaeal KH domain protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAGG AATTAAAGAT TGCAACAAGC AGGGTAGGCG TCCTGATTGG AAAGGGCGGC 
TCGACAAAAA AAGAGCTCGA GGAAAAGACC CACACAACGA TCTCCATCGA CAGCAAGGAG
GGGCTTGTCA AAGTCGAGGC TGCCGAGGAA AATGCAATCC CGCTCCTGCG GGCCGTAGAG
ATTATAAACG CACTCAATGC CGGTTTCTCC CCCCAGCGCG CTTTTGAAAT GATCGAAGAC
GAGGATCTCC TTCTCGATAT CATCGATCTT TCGCGGGTAG CGGACAACCC CCGGCAGCTC
GACCGGCTTC GGGGCCGGAT CATCGGAAAG GACGGACGCG CCCGCGAGCA GATCGAGAAC
ATGACTGACG TTGACATCTC GGTCTTCGGC CACACCGTCG GCCTGATCGG GTACCCCGAG
CAGATGAAGA TAGCGAGGGC GGCCATCGAC ATGCTCATCG AGGGTGTCCC CCACGAGAAC
GTCTTTGCAT TCCTCGACAA GAAGAAGAAA GAGGCCAAGC AGGACATGAT CAGTTACTAT
TACTGA
 
Protein sequence
MIQELKIATS RVGVLIGKGG STKKELEEKT HTTISIDSKE GLVKVEAAEE NAIPLLRAVE 
IINALNAGFS PQRAFEMIED EDLLLDIIDL SRVADNPRQL DRLRGRIIGK DGRAREQIEN
MTDVDISVFG HTVGLIGYPE QMKIARAAID MLIEGVPHEN VFAFLDKKKK EAKQDMISYY
Y