Gene Mboo_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2450 
Symbol 
ID5412010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2531612 
End bp2532742 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content53% 
IMG OID640869707 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_001405607 
Protein GI154151989 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACC TGACCGTTAT CATTCCCACC TTCAAGGAAG AGTCCAACAT CGGTACCATT 
ATCAAGGCCG TGGATGCGGT TTTTTTGCAG AATAGGATCA ATGGGGAGAT CCTTATCGTT
GATGACAATT CTCCGGACCG GACCATCGAA CTGGTACGAG AGATGCAGAA GACCCTGCCT
TATCTCAGCC TTGCGGTAAG GATCGAAGAT CCCGGGCTCT CCCAGTCTGT CGTCGAAGGG
TTCCGGAGAG CGCAATCGGA TATCTTTCTT GTGATCGATG CCGATCTCTC CCACCCGCCG
GAACACATTC CCCTCATGCT TGCAGAGATC CGGGCGGGAA ATGACATTGT CATCGGAAGC
CGGTACATGG AGGGCGGCGG GATAAAAAAA TGGCCGCTAA AACGGCGTAT TATCTCCCTT
GGGGCAACCT TTCTGGGCCG GCTCCTATTT CCGGAGATTC ACGATCCGGT GAGCGGCTTT
TTTGCAGTAA AAAGGGGTGT TGTAGATCAT GCGCCGCTCA GGCCCAGAGG CTACAAGATC
CTGCTTGAGG TACTGGGCAA GGGCACTTGG CATACAGTAA AGGAGATCCC GTTTGAATTT
GTTGACCGGG CAATCGGATC GAGCAAACTC GGGTGGCGCA CAATCATCGA GTACGCCGCA
CAGGTTCTGG ACAATGCACG ATTCTCATGG AACCACCACG GGAGCGTGGT CTGGCAGGAA
TGGGTCAAGC TGTTCCGGTT CGGGATAGTT GGGCTCACGG GCATTATCGT CAACGAAGGG
CTTCTCATCT ATCTCAGGAG CTATGCACAG TTTGCCCTGC CGGTTGCAAG TATTATTTCC
ATTGAGCTCT CGATCCTGAG CAATTTTATC CTCAACGACA GCTGGACGTT CAAAACCGGG
CAGCACGCCC TGCCTCATTG GTGGCAGCGT CTTCTCTCGT TTCAGGTTGT TTCCCTCGGA
GGGGCAGCGA TAAATTTTGT TATCCTCAAT GCCCTTGCCC TGTATGTTGG TGTTGACTAC
CGGGTTGCCA ATATTCTGGG TATCGTTGTG GCGTTTGCAT GGAATTTTCT GGTAAACCGG
CGGGTGACGT GGAAAAAATC CGGGCAGGTA GTACCGAGCC AGGAAAAATA A
 
Protein sequence
MYDLTVIIPT FKEESNIGTI IKAVDAVFLQ NRINGEILIV DDNSPDRTIE LVREMQKTLP 
YLSLAVRIED PGLSQSVVEG FRRAQSDIFL VIDADLSHPP EHIPLMLAEI RAGNDIVIGS
RYMEGGGIKK WPLKRRIISL GATFLGRLLF PEIHDPVSGF FAVKRGVVDH APLRPRGYKI
LLEVLGKGTW HTVKEIPFEF VDRAIGSSKL GWRTIIEYAA QVLDNARFSW NHHGSVVWQE
WVKLFRFGIV GLTGIIVNEG LLIYLRSYAQ FALPVASIIS IELSILSNFI LNDSWTFKTG
QHALPHWWQR LLSFQVVSLG GAAINFVILN ALALYVGVDY RVANILGIVV AFAWNFLVNR
RVTWKKSGQV VPSQEK