Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2444 |
Symbol | |
ID | 5412004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2523559 |
End bp | 2525481 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640869701 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001405601 |
Protein GI | 154151983 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCAC AGCCTTTGTT TCTCCCGCGC ACTCCTGCCG AGGGCAGGGC GTGCGGCATC GAAGAGTTTG ATATCATTCT TGTCACGGGG GATGCGTACG TCGATCATCC TTCGTTTGGC ACGGCACTTG TCGGCCGGGT CCTCTGGGAC GCCGGATTCT CCGTAGGCAT CATTGCGCAG CCGGATGCAA CAACAGAAAA GGACTTTACT GTACTTGGCA GGCCCCGGCT TTTCTTTGGC ATATCGTCCG GTAACGTTGA CTCGATGGTC AACAATTTCA CACCCAACCT GAAGCGCCGG AGTTCCGATG TGTACTCCCA CGGCGGGATC CCTCGGCGCC CCGACCGGGC CGCCATCGTG TACGCCAACC GGGTCCATGC AGCATTTCCC GACACACCCA TTGTTCTCGG GGGCATCGAG GCCAGCCTGC GCCGATTTGC GCACTACGAT TACTGGCAGG ACCGGGTCCG CCAGTCCATC CTTGCCGATG CACCGGCCGA CCTCCTTGCC TATGGCATGG CAGAGCAACA GATGGTGGCG ATTGCCCGGC GGCTGGACAC CGGCGAACCG GCCCGGGCCA TCCGGGATAT CCCGGGCACC TGTTATACCA TGGAGGTGGC AGAATGGCGT GCCACTCACC CGGAGGGTGT TGTCGAGATC CCGGGTTTCT CCGAGATTTC TTCGGACAAG ACCGCGTATG CCCGGGCTTT TGCCCTCCAC TACCGCGAGC AGGACCCGGT CCGGGGCCGC CCGGTGGCCC AGCCTCACCC CAAGACCGTG ATCGTCCAGA ACCCCCCGGC CCGGCCCCTT TCGGGCGACA AACTCGACCA TATCTACGAG CTGCCGTTCT CGCGCCGGGC CCACCCGCTG TACAAAAAAC CCGTCCCGGC GCTCGAGCCG GTGCAGTTCT CGGTGGTGAG CCATCGTGGC TGCTTTGGGA GCTGCTCGTT CTGCGCCCTC ACCCATCACC AGGGTCGGAT TGTCCAGAGC CGGAGCGCTG CCTCAATCGT CCGTGAGGTT ACCCGGATGG CTGCGATGCC GGAGTTTAAG GGAATTGTCC AGGATGTGGG CGGGCCGACT GCCAACATGT ATGGGATGGC CTGCGAGCGC TGGGACGGGG CAGGCGCCTG TCCGGAAAAG TCCTGCTCGC CGGCCTGCCA AACACTTCGG ACAAACCACC GCCCACTGGT GGAGATTCTC CGCAAAATCA GCGAAGTCCC GGGCGTAAAG AAGGTGTTTG TGGGCTCAGG TATCCGCTAT GATCTTGTGC TGGCCGATGA TCTTAATTCC CGGTACCTTG AGACCCTTTG CGAGCGGCAT GTCTCGGGCC ATCTCAAGGT CGCTCCCGAG CACATCTCGC CCCGGGTTAC AAAAGCCATG AACAAGCCCG ACGGATCCGT CTTCGAGAGG TTCCGGGACC GGTTTACGGC GCTCCAGCAG GGGAAGGCAA AACGCCAGTA CCTAGTCCCC TACTTCATGT CCGGCCACCC GGGCTGCACC ATAAGCGACA TGGTAGCGCT TGCCGAGTAT ATCCGCGACC GCGGGCTCTA TACCGAGCAG GTGCAGGATT TTACCCCCAC TCCTATGAGC GTCTCCACGT GCATGTACTA TACCGGCCTT GACCCGTTCA CGCTCGAACC GGTGCATGTG CCCAAAGGAA GGGAGAAGAA GATCCAGCGG GCACTCCTGC AGTACCGCGA GCCGCAGAAC CGTGGCCTTG TGTTCGAAGG ACTCCGGATG GCCGGCCGGG AAGACCTGAT CGGGACCGGG AAGCAGTGCC TTGTGAGCGG GGACGTTTAC CTTAGGCGGT CCCGTCCCGG TCCTGTACCC CGACAAAAAT CATCCGGCAC TCGTCCCGGT GGCGCAGCCG GATCGGGAAC CTCCCGGAAA AAAGAAAGAC CGGGCTCTCA GGACCTGCCG TAA
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Protein sequence | MRSQPLFLPR TPAEGRACGI EEFDIILVTG DAYVDHPSFG TALVGRVLWD AGFSVGIIAQ PDATTEKDFT VLGRPRLFFG ISSGNVDSMV NNFTPNLKRR SSDVYSHGGI PRRPDRAAIV YANRVHAAFP DTPIVLGGIE ASLRRFAHYD YWQDRVRQSI LADAPADLLA YGMAEQQMVA IARRLDTGEP ARAIRDIPGT CYTMEVAEWR ATHPEGVVEI PGFSEISSDK TAYARAFALH YREQDPVRGR PVAQPHPKTV IVQNPPARPL SGDKLDHIYE LPFSRRAHPL YKKPVPALEP VQFSVVSHRG CFGSCSFCAL THHQGRIVQS RSAASIVREV TRMAAMPEFK GIVQDVGGPT ANMYGMACER WDGAGACPEK SCSPACQTLR TNHRPLVEIL RKISEVPGVK KVFVGSGIRY DLVLADDLNS RYLETLCERH VSGHLKVAPE HISPRVTKAM NKPDGSVFER FRDRFTALQQ GKAKRQYLVP YFMSGHPGCT ISDMVALAEY IRDRGLYTEQ VQDFTPTPMS VSTCMYYTGL DPFTLEPVHV PKGREKKIQR ALLQYREPQN RGLVFEGLRM AGREDLIGTG KQCLVSGDVY LRRSRPGPVP RQKSSGTRPG GAAGSGTSRK KERPGSQDLP
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