Gene Mboo_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2442 
Symbol 
ID5412002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2520286 
End bp2522109 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content61% 
IMG OID640869699 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_001405599 
Protein GI154151981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGGA TCGCGGGGCA GTACTGCTAT GCCAGGGGGC GGCCGGACCG CCGGCTCCTT 
TCGGCCATGT CAGAGAGGCT TGCCCATCGC GGCCCGGATG GCGAGGGCAC CCATGTAAGC
GGGAGTGTCG GCCTTGTCCA CCGCAGGCTT GCCATCATCG ATCTTTCCCC TGACGGCCTC
CAGCCAATGA CAAACGAAGA CGGAACACTC TGGCTGGTCT TTAACGGCGA GATCTATAAT
TTTGTCGAGC TCCGCGAGGA GCTGGCGCAC AAGGGGCACA CGTTCTACTC AAAGTCCGAT
ACCGAGGTGA TCCTCCATGC CTACGAGGAA TGGGGGTACG AGTGCCTTTT CCGGTTTAAC
GGCATGTGGG CGTTTGCCCT CTGGGATGAG AAAAAACAGG AGCTCTTCTG CGCCCGGGAC
CGGTTCGGGA TCAAGCCGTT CTATTACGCA GAAGCCGGGG GGTCGTTTTT GTTTGCCTCC
GAGATCAAGG CGCTCCTTAC TCATCCGGCG GTGGGAAAAC ACCCGAACCA GCAGATGCTT
GGCACCTATC TTGCCTGGGG AGTGCAGGAC CACTGTAGCC GGACAATGTT TGAAGGGATC
TTCCAGATCG AACCGGCCCA CGCTCTGGTG GTGACAAAAG ATGGAATTAC ACCTCCCTTC
CGGTACTGGG ACGTGACCGT AAACCCGGCA ATCCGGGGCG GGGAGGATGA TGCCACAGTT
GCCGCACGGC TTAAAACTCT ACTCCGGGAA GCCACCCGGA TCCATACGCG GAGTGATGTG
GCGGTCGGTA CCTGCCTCTC GGGAGGGATC GATTCTTCGG CGCTCACGGC CACGATCAAC
ACCCTCATCC GGAGCGATGC CCCGGGGAGT GTGGGTGAAC GCCAGAAGAC ATTCTCAGTA
GTTTTCCCGG GTACGCGCTT TGACGAGAGC CGGTACATCG ACGAGGTCGT GGCGGCCACC
GGGGTGGACG CGGATCGGAC CGAGCCGGCC CCGGGCCAGC TCCAGAAGGA TATCGGACAC
CTTGTGTACC TGCAGGATGA ACCGTTTGGC TCGCTCTCCA TCTATGCCCA GTACTGCGTG
ATGCGCCTTG CACAAAAGAA GGTCAAGGTT GTGCTGGATG GGCAGGGAGC AGACGAGCTC
CTTGGCGGGT ACCTGGGCTA CCAGGGGAGT TATATCCGGG GACTCATGTG GAATCTCCGG
TGGGGTACGG CAGCAGGAGA GATCGCCGGA AGCCTCCGCA GGCACCGGGC ATTCTTTGCC
TCTGCCCGAA AGCAGCTCGC GGTGCGGCGG ACCCGGCGGG GCCTGGTGAA ATGCCCGGCA
GCACCGGTGG ACCGGTACAG CGGCACGCTC GATTGTGTTT TGCACCGCGA GCTCTTCTCC
ACCAACCTGC CGGCCCTCCT CCATTACGAG GACCGGAACT CGATGGCATT CTCATTAGAG
TCCCGCGTGC CGTACCTCGA TGTGCGACTG GTAGAATACG CAGCATCGCT CCCGCTCTCG
CAGAAGATCC GGGGAGGCTG CACCAAGGTT GCCCTGCGGG CCGCAATCAG GGGACTGGTT
CCCGAATCCG TGCGGTGCAG AGGGGACAAG ATGGGCTTTG TCACTCCGGA GGAATGCTGG
ATAAAAGAGG AACTCAGGGC GTTTATGCTC GATATTTTCT CCTCGGAGAG TTTCAGATCC
CGGTCCTTCT GGGACGCAGA CGCGGTCATG CAGGACTATG AGGCGTTCCT TGCCGGCACG
GCACCTTATT CTCCCGAGAT CTGGCGGATT GCCTGCGCTG AGCTCTGGCT CCGGACCTTT
TTTGATGCCC CGACCGCGGC TTAA
 
Protein sequence
MCGIAGQYCY ARGRPDRRLL SAMSERLAHR GPDGEGTHVS GSVGLVHRRL AIIDLSPDGL 
QPMTNEDGTL WLVFNGEIYN FVELREELAH KGHTFYSKSD TEVILHAYEE WGYECLFRFN
GMWAFALWDE KKQELFCARD RFGIKPFYYA EAGGSFLFAS EIKALLTHPA VGKHPNQQML
GTYLAWGVQD HCSRTMFEGI FQIEPAHALV VTKDGITPPF RYWDVTVNPA IRGGEDDATV
AARLKTLLRE ATRIHTRSDV AVGTCLSGGI DSSALTATIN TLIRSDAPGS VGERQKTFSV
VFPGTRFDES RYIDEVVAAT GVDADRTEPA PGQLQKDIGH LVYLQDEPFG SLSIYAQYCV
MRLAQKKVKV VLDGQGADEL LGGYLGYQGS YIRGLMWNLR WGTAAGEIAG SLRRHRAFFA
SARKQLAVRR TRRGLVKCPA APVDRYSGTL DCVLHRELFS TNLPALLHYE DRNSMAFSLE
SRVPYLDVRL VEYAASLPLS QKIRGGCTKV ALRAAIRGLV PESVRCRGDK MGFVTPEECW
IKEELRAFML DIFSSESFRS RSFWDADAVM QDYEAFLAGT APYSPEIWRI ACAELWLRTF
FDAPTAA