| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2430 |
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| Symbol | |
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| ID | 5410694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2507164 |
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| End bp | 2509629 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869687 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001405587 |
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| Protein GI | 154151969 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTGA GACAGCAGAC TGCCGAACTG ATCCGGGAGG TCCTCAAAAA AAATCCGCAG
GGCCTGAACA TCACAGAGAT TGTCCGGCAG ATCCGCGTAA ACCGGAATAC AGCAGGAAGG
TACCTTGAGA AGCTGCTGGT TTCAGGGCAG GTAGAATTGC GCCATTTGGG CATGGCCAAG
ATCTATGCGC TCGCCAACCG CGTCCCGGTC TCCGCGGTCC TCTCCATCTC CTCAGAATGT
ATCCTGCAGC TGGACAGCAG CACCCGGATT GTTTTTATCA ATGACACATT CTCCCGCTTC
CTCTCTGTGC CGGCAAACGA GCTGGCCGGG AAGAACATCG AGTATACGCC ACTGGTCACA
GCATTCGACG ACCTGTTTCC CGCATTCATG GACCGGGTGC ATGCGGGACT GGAAGGCACT
GAGTGGCGGG GGGAACTGGG ACCTGTCCGT GGCGGAATCT ATTTCTCTTA CCGGATTGCC
CCCACTGCCC TCGACCACGG GCAGAAAGGC GTCTCGGTCA TCCTTGAGGA TATCACCGCG
GCAAAGATGG CAGGAGCCTG CCTGCGCGAG AGCGAGGAGA GGTACCGCCT GCTTGCCGAA
TCCTCAAGCG ATCTGATCTT TGTGATTGAC GCGGATGACC GGGTCGAATA CGTCAACAGC
TATGCAGCCG CATTTCTGGG AACAACACCT GCCGAGGTAA CCGGGAAGGC CCGGGCGCTT
CTCTTTCCTC CGCAGATTGC ACACCGGCAG GGAAAGATGC TTCAGGAGGT CTTCTCCACC
GGGAAATCCC TGCACAGCGA GGGGCCGCTC CCGGTGGATG GAGAGATGCG ATGGTTCGAC
TATGTGCTCG TGCCGCTCAA AAGTCCCGAC GGATCGGTGC GCTCGGTCAT GGGCATCTCC
CGTGATATCA GCGGACGCAA ACAGGCCGAA GAGACGTTAA AGAACAGCGA AGAGCGCTAC
CGGCGGCTCC TGCAGCAATC CTTCGATGCG ATCGTAATCC ACAAGAAAGG GATTATTACA
CTCGTAAACG AGGCCGCTGT TGCCCTTGCC GGAGTATCCT CGCCCGATGA ACTGGTGGGA
AAACCTATCC TTGATTTTGT CCATCCCGGT TCCCGGGAAC TTGTCCAAGC CAGGGTGGCT
ACGTTTACAG ATCAAAGCAG GCCACTGACC GTTGCCCTGG CAGAAGAGAA ATTTGTCCGG
CCCGATGGCA AGATCATCGA TGCCGAAGTC CTTGCCACAA GCTTTCCTGA TGACGGTGGT
GTCGCAGTCC AGGTGGTGTT CCGGGACATT ACCAGGAAAA AGGAGCTCGC GGAGGCGCTG
CGCCAATCGG AGGAAAAATA TCGCACTCTT GTAGAACACA GCCAGAACGG GGTTTTTATC
ATCCAAGGCC GGAAGATCCT GTACGTCAAT TCAGCGTTCG CCCGGATACT GGGAGGACGT
ACGGAGGATT TTACCGGGGG GGACTTTGGT GCCTGCATCG CTCCCGAGGA CCGGGATCGG
GTGCTCGACA TTGGGCACCG CCGGCAGCGG GGTGAACCGG TGCCGGAGAC CTACGAATGC
ATCCTGCTCA AACGGGACGG GACCACCCGG GTCATTGTCT CTCTGGATGC CGGGCTCATC
CAGTACCAGG GAGCGCCGGC CAGCATGGGG ACCATACGGG ATATCACGGA ACAGAAACAT
GCCGAGGCAG AGCTCAGGGA AAGCAGCGGG ATGCTCCGGG CCATTTTCGA TTCCACGTTC
CAGTTCACGG GCCTGGTAAC GCCTAAGGGT ATCCTCACCG ATGTCAACCG TACTGCCCTG
GACTTTACCG GGATAACCCG CGATGAGGCA GTCAACCGCC CCTTCTGGGA GGGGCGGTGG
TGGCAGGGAG ATACGGTACG GGTACAGCAG CTCCGCGAAG CGATATCCAA AGCGGCTTCG
GGGACTTTTG TCCGGTACGA GACCATGGTG CAAGGTGTCG GGGTTGCTGT AGTGGATGTG
GACTTCTCCC TCAAGCCTGT CTTTGATCCC CAGGGGAATA TCCGGTTACT CATAGCTGAG
GGCAGGGACA TTACTGCCAG AAGAAGGGCC GAGGATGCAC TGCGGGAGAG CGAAGAGCGA
TTCCGGCGGG TATTTGAGGA TGGGCCGCTT GGGATGGCAA TCGTGGACAG GAACCGCCGG
TTTGTCTCAG TGAACCGGAT GTGCTGCGAA ATGTTCGGCT ATTCTGAAGA TGAGCTGCGG
AAAAAGACCA TTGAAGACGT GACCCACCCA GACAACCGGG ATGAGGACGC AGCCCAGATG
CAGAAACTCT ATGCGGGAAA AATCACCCGG TACCGCACAG AGAAGCGATA CATCAGGAAA
GACGGTTCCG TGTGCTGGGG CTCGCTGACG GTGAGCCCGC TTAGGGACAA GAACGGAAAG
ATTGTTTCCA CAATAGGTCT CGTTGAAGAG ATCGCGGGCC GGACGGAAAC AAAAGAAGTA
TCATGA
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| Protein sequence | MVLRQQTAEL IREVLKKNPQ GLNITEIVRQ IRVNRNTAGR YLEKLLVSGQ VELRHLGMAK
IYALANRVPV SAVLSISSEC ILQLDSSTRI VFINDTFSRF LSVPANELAG KNIEYTPLVT
AFDDLFPAFM DRVHAGLEGT EWRGELGPVR GGIYFSYRIA PTALDHGQKG VSVILEDITA
AKMAGACLRE SEERYRLLAE SSSDLIFVID ADDRVEYVNS YAAAFLGTTP AEVTGKARAL
LFPPQIAHRQ GKMLQEVFST GKSLHSEGPL PVDGEMRWFD YVLVPLKSPD GSVRSVMGIS
RDISGRKQAE ETLKNSEERY RRLLQQSFDA IVIHKKGIIT LVNEAAVALA GVSSPDELVG
KPILDFVHPG SRELVQARVA TFTDQSRPLT VALAEEKFVR PDGKIIDAEV LATSFPDDGG
VAVQVVFRDI TRKKELAEAL RQSEEKYRTL VEHSQNGVFI IQGRKILYVN SAFARILGGR
TEDFTGGDFG ACIAPEDRDR VLDIGHRRQR GEPVPETYEC ILLKRDGTTR VIVSLDAGLI
QYQGAPASMG TIRDITEQKH AEAELRESSG MLRAIFDSTF QFTGLVTPKG ILTDVNRTAL
DFTGITRDEA VNRPFWEGRW WQGDTVRVQQ LREAISKAAS GTFVRYETMV QGVGVAVVDV
DFSLKPVFDP QGNIRLLIAE GRDITARRRA EDALRESEER FRRVFEDGPL GMAIVDRNRR
FVSVNRMCCE MFGYSEDELR KKTIEDVTHP DNRDEDAAQM QKLYAGKITR YRTEKRYIRK
DGSVCWGSLT VSPLRDKNGK IVSTIGLVEE IAGRTETKEV S
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