Gene Mboo_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2428 
Symbol 
ID5410692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2505207 
End bp2506412 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content64% 
IMG OID640869685 
Producthypothetical protein 
Protein accessionYP_001405585 
Protein GI154151967 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCC TTGTTTTTGA CCCGTTCCAC GGCGCGGCAG GGGACATGAT CACCGCGGCC 
CTGCTCGATT GCGGGGCGGA CCACAAGGCG GTTGTTGCTG CCATGCGGGC TGTGGTCGCC
GATCCGGGCG TTGAGACGGT GACCCGGGCC GGGATCCGGG CCATAAAGGT CCGCACCCAT
GCCACCCCGG TCCACCGGAC GCTCGCGGAC GTGGAAAGAA AACTGGATGC AGCAGCCCCG
CACATCCCGG CTGATGCACT TGCCATGGCC CGCCGGGTCT TTGCCCGGCT CAATACGGCA
GAAGAATCTG TCCACGGCGA ACACGTCCAC TTTCACGAGG TTGGGGCGGA CGATGCGATT
GCGGATGTGG TCGGAGCCTG CACAGCGCTC TTCTCGCTCA AACCACAGGG CGTCGCAATC
CTTCCCATAG CCCTTGGCTC CGGCACGATC ACCGGCTCGC ACGGCACGAT CCCGGTCCCG
GCCCCGGCAA CAGCGGCGAT TCTTGCAGGC TCGGGCCTCG CAGTATTTCC CGGGAGCGAC
TCAGGTGAGC TCTGCACTCC CACAGGGGCA GCACTCCTTG CCGAGTTTGC CGCGTCTCTG
CCGGCCAGAC TCGGGGCGTA CACGATCCTC GCAACCGGTT ACGGTGCCGG GACAAAAGAC
TCCCCCAAAG TCCCTAATGT CCTGCGGGCC ATGGTGGTGG AGAGCGCCGG CGCTCCGGCT
GCAATGCCGC AGGATGCCGT CGATCTCCTG GAGACAAACG TGGATGACGC AAGCGGCGAG
GTGATCGGTG AAGCCCTCGC CCGGTTCATG GCCGCCGGGG CACGGGATGC CAGCGCAATT
CCAATCCTGA TGAAGAAAGG CAGACCGGGG TACCTGGTCA CAGTGATCGC ACCACCGGAT
TCATCCGCCG GACTAGCCCG GCTCATGGCG CAGGAACTCG GGACACTCGG GGTCAGGTGC
ATCCCGGCTG TGCACCGGTT CATCGCAGAT CGGACTACCG GTACTGTGGA AGTGACTTTT
GCCGGCCATA CAAAGGACAT CCCGGTGAAA TATGGCTGGA TCGAGGGCAG GTGCTACACG
GCAAAACCGG AGTTCGATGC AGCAAAGGAG TGGGCAGGCG AGCTCGGACT CCCGGTCCGT
GAAGTGCTCC GGGCCATCAG TGATACACTT GATACACAGG AAAAAGCCGG GAGGCAGGAC
ACGTGA
 
Protein sequence
MRILVFDPFH GAAGDMITAA LLDCGADHKA VVAAMRAVVA DPGVETVTRA GIRAIKVRTH 
ATPVHRTLAD VERKLDAAAP HIPADALAMA RRVFARLNTA EESVHGEHVH FHEVGADDAI
ADVVGACTAL FSLKPQGVAI LPIALGSGTI TGSHGTIPVP APATAAILAG SGLAVFPGSD
SGELCTPTGA ALLAEFAASL PARLGAYTIL ATGYGAGTKD SPKVPNVLRA MVVESAGAPA
AMPQDAVDLL ETNVDDASGE VIGEALARFM AAGARDASAI PILMKKGRPG YLVTVIAPPD
SSAGLARLMA QELGTLGVRC IPAVHRFIAD RTTGTVEVTF AGHTKDIPVK YGWIEGRCYT
AKPEFDAAKE WAGELGLPVR EVLRAISDTL DTQEKAGRQD T