| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2427 |
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| Symbol | |
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| ID | 5410691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2502746 |
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| End bp | 2505163 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640869684 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001405584 |
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| Protein GI | 154151966 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAG TGCAACTGAA GGTCGATTCC GCGTACCCCG GGGATCAGGG CGGGGGAAAA
GCGCGGCTCG ATCCCGAGAC CATGCTTCTC CTTAAAATTT CGCCCGGTGA CCTTGTGGTG
ATCGAAGGGA AGCGCCGGAC CGTGGCCAAG GTCTGGCGGG CGCTTGTCGA GGACTGGAAC
CAGAGAAAGA TCCGGATCGA CAATTTCACC CGGCTCAATG CCGGGGTGAG CATCGGGGAC
ACTGTGAAGA TCTCCACGCT TTCAGAAGAG ATCGAGGCAA AGCGCGTGGT TCTAGCTCCT
CCCGAGGATC TGCCAAAGAA GATCCCAATC GCCAATAACC CTCACGTGAT TAACGGCCTT
TTGGATTTCC CTGTCGTGAA AAACGACTCG ATCCCGATCA TGCTTGGCCT GCCCTTTGTC
CAGCCGCAGA TCGTGGCTTT CAAGGTGGTG GAGATCGAGC CCGAGGAGGC GGTCATCATC
ACGAAGAATA CTTCGGTCGA GTTCTCGGAC AAGCCGGCCG CGGGGTTCGA AGGCGTGAAA
CGGTTCTCGT ACGAGGATAT CGGGGGCTTA AAAGATGAGC TCCAGCGGCT CCGCGAGACA
ATCGAGCTCC CGCTCCGCCA TCCCGAGCTC TTCCAGAAAC TGGGAATCGA GCCGCCCAAG
GGTGTTTTGC TGTACGGCCC ACCGGGAACG GGAAAGACGC TGATCGCAAA AGCGGTGGCA
AGCGAGAGCG GTGCGCATTT CATCTCGATT GCCGGCCCCG AAGTCATTTC GAAATACTAT
GGTGAAAGCG AACAGCGGCT CCGCGAAGTT TTTGAGGAGG CCCGCGAGAA TTCGCCCTCG
ATCATCTTCA TCGACGAGCT TGACTCGATT GCACCCCGGC GCGAGGAAGT GACCGGGGAA
GTGGAGCGTC GTGTCGTGGC CCAGCTCTTA ACCATGATGG ACGGGCTTGA AGAGCGTGGA
CAGGTCGTGG TGATCGGTGC CACCAACCGC GTTGATGCGA TCGATGCCGC CCTGCGCCGG
CCCGGGCGCT TTGACCGGGA GATCGAGATC GGTGTGCCGG GCGAGCCCGA CAGGATTGAG
ATCTTAAAGA TCCATACCCG GGGCATGCCG CTTGCCGAGG ATGTGAGCCT GAATGTGCTC
GCCCAGCAGA CCCACGGATT TGTGGGAGCA GATCTTGCCG CACTTGCCCG TGAGGCTGCG
ATCCGGGCCC TGCGCCGGTA CCTGCCCGAT CTCGATCTGG ACAAGGCCGA GATCGAGCAG
GAAACCTTGG ACAAGCTCAA GGTCTTTGCC GCGGACTTCC GGAGCGCACA GCGTGATGTG
GGTCCGAGCG CGATGCGTGA AGTGATGCTC GAGGTCTCGC ACGTGAAGTG GGAGACGGTT
GGCGGCCTTG AGTCGGCCAA GACCGAGGTC CGCGAGGCAG TCGAGTACCC GCTGACGCAC
CGTGAGCGTT TCGATGACCT CGGGATCGAG CCGCCAAAAG GTGTGCTCCT CTTTGGCCCG
CCAGGGACAG GTAAGACACT CATTGCAAAA GCCGTTGCAA GCGAAAGCGG TGCCAACTTT
ATCCCGGTCC GGGGCCCGCA GCTCCTCTCC AAGTGGGTGG GTGAGAGCGA GCGGGCGGTC
CGGGAGATTT TCAAGAAGGC CCGGCAGGTC TCACCTTCGA TCATCTTCTT TGACGAAATC
GATGCGCTTG CCCCTGCCCG GGGGAGCTCG AACGATTCAC ACGTGATCGA CAACGTGCTC
AACCAGATCC TCACCGAGAT GGATGGACTT GAAGAGCTCA AAGATGTCGT TGTGATGGGC
GCAACAAACC GGCCCGATAT CGTGGACCCG GCGCTTTTGC GTGCCGGCCG GTTCGACCGG
CTCGTGTACA TCGGCGAACC GACCATGGAG GACAGGAAAA AGATCATTGG TATCCACACG
CAGTACATGC CGCTCGAAGG CTCGGGGCTT GAGGAGATTG TGGTTTCAAC TGAGGGCTAT
TCCGAGGACA TGCTCGCGGA GCTCGTGGAG AAACTCGGTA AGGACAGGAT GGTCACGTCC
GATGCCGTGA AAACGACAAT CGTCCCGGCC ACGGATAAGG CAGCCGGTGT TGCAAAAGGC
GCCCGGCGCC GGCGCCTCGT TGACCTGTTC CGGGAGAAGC ACCTCGCGTT TGCGGACCCG
GCCCGGGAGA AAGTCCTTGC CGATCTCTCG GACATGACTG CCGGCTTTGT CGGTGCCGAT
CTCGAATCGC TCTGCCGTGA GGCGGGCATG CTCGCCCTCC GCGAGGGTGC GGACTTTGTC
GCGGAGAAAC ACTTCCTTGA AGCGCAGAAG AAGGTTCACC CGACAATGAA CGATAACCTC
CGGGATTACT ATGGCAAAAT CCAGCAGCAC TTCAAGGGCG GCCTGCCCCA GAAAGTGCAG
CCGCCGGAGT ATCAGTAA
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| Protein sequence | MPEVQLKVDS AYPGDQGGGK ARLDPETMLL LKISPGDLVV IEGKRRTVAK VWRALVEDWN
QRKIRIDNFT RLNAGVSIGD TVKISTLSEE IEAKRVVLAP PEDLPKKIPI ANNPHVINGL
LDFPVVKNDS IPIMLGLPFV QPQIVAFKVV EIEPEEAVII TKNTSVEFSD KPAAGFEGVK
RFSYEDIGGL KDELQRLRET IELPLRHPEL FQKLGIEPPK GVLLYGPPGT GKTLIAKAVA
SESGAHFISI AGPEVISKYY GESEQRLREV FEEARENSPS IIFIDELDSI APRREEVTGE
VERRVVAQLL TMMDGLEERG QVVVIGATNR VDAIDAALRR PGRFDREIEI GVPGEPDRIE
ILKIHTRGMP LAEDVSLNVL AQQTHGFVGA DLAALAREAA IRALRRYLPD LDLDKAEIEQ
ETLDKLKVFA ADFRSAQRDV GPSAMREVML EVSHVKWETV GGLESAKTEV REAVEYPLTH
RERFDDLGIE PPKGVLLFGP PGTGKTLIAK AVASESGANF IPVRGPQLLS KWVGESERAV
REIFKKARQV SPSIIFFDEI DALAPARGSS NDSHVIDNVL NQILTEMDGL EELKDVVVMG
ATNRPDIVDP ALLRAGRFDR LVYIGEPTME DRKKIIGIHT QYMPLEGSGL EEIVVSTEGY
SEDMLAELVE KLGKDRMVTS DAVKTTIVPA TDKAAGVAKG ARRRRLVDLF REKHLAFADP
AREKVLADLS DMTAGFVGAD LESLCREAGM LALREGADFV AEKHFLEAQK KVHPTMNDNL
RDYYGKIQQH FKGGLPQKVQ PPEYQ
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