| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2419 |
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| Symbol | |
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| ID | 5410495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2490310 |
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| End bp | 2492364 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869676 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001405576 |
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| Protein GI | 154151958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AGATCTCCAT CCCGAAAAAG AAGCTCCGCC TGCCCCGTCT TAAAAAACAG
GCCCGGATCC CGATCCTGAT TGCCATATGC GTCATCCTGG TTGCGCTCGG GCTGTTATTC
CATATCCTGC CGGGCCCGGG CAGTCTTGCA CATTTTTTTG AGGCAAAAAC CAGCACAGAG
TCACTCCAGT CCGTCGGGGG AGCAACAACC GGGCTTGCCG AACCTCTCGC GCCGCCTCTC
ATAGCCGACT TCCTTGCCTC GCCCGGCTAT CAGTCAAACC CCCTCTCCGT CCAGTTCTTC
GATATGAGCA GGGGCAGCCC GGGCGCCTGG CAGTGGGACT TTGGCGACAA TTCCAGTTCA
TCCCTCCAGT ACCCGGTTCA TGAGTATGCC TCCGGGGGCC TCTACAACGT CGCCCTCACG
GTCACCCGGC AGGACGGCGC CCGGGAGACC GTCACGGTAG ACGATGTCCT TGATACCCGG
CAGGCAACCG AATCGCAGGT TCTTCTCGAT ACCATCCGCA ACGGTGCAAT AAAGAAAGGA
TCGTACCTCT CCTTTATTTC GGACGACAGT AACTCGTCGG TCACCGTGAA CGGGGCCCGG
ATAGCACTGC CGGCAGGATC GCTTGTCAAG ATCCGGGCCG GCTCTGACTC CACGACCGGT
ACGGTCTCCC TGCGGGGCGG AAACATCCTG GGCTGCAGCC TTGCGGATGC CACGCTCTTT
GTGAACGGGA CCCAGGTGGC TAAAGGGAGC TTTGGGAACT GCAACATCCC CTCGGTCCGG
CAGTACCATG CAAACCTCAC CTTTTCCGTA GAGCCGACAT ACGGGGAGGT CCGGCAGCTC
CTGATCAATG GCGGCAAAAT CCTCGCAGGC CCGGGCAACA ACTACATTGT CATCTCTGAT
GACACGTACT CCCCGGGCAA CGATCTGACA GTGGTTGCCG GTCCCGCGTA CTATGAGGGG
ACAGCCTCAG GATATTCGAT CTCACCTGCG CTGATTGCCG GGTTCACCAC GATCTCGCCC
ACAGAAGGCC CGGCCCCGCT TAATGTCTCG TTTATAGACC AGTCGGCCGG AGCACCCGTT
TCATGGTCAT GGGATTTCGG GGATGGCACC GGTTCACGCG ACAAAAACCC TACACATCTT
TATGCATCCC CGGGGACCTA CGATGTTTCC CTTACGGTAA ATACCGCGGA CCAGACCGAC
ACCACCACAG TACAAAGCGA GGTCATCGCA ACCCCGCCCC GGGTTGTCGC CAACTTTACC
GCCCGGCCGC TCACCGGCCC GGTACCTTTT ACGGTCAGGT TTACGGATCA ATCCACCGGA
TTCCCGACTT CGTGGAGCTG GACCTTCCAG GAGGCATGGA ATATCTCCTT CCTCAGCAGC
GGTACCAGTA GTCCATTCGC TGTTTCGACT GATCAAAATC CCGTTATAAC CTTCACAGAT
CCGGGAACTT ACAATGTCTG GCTTACGGTA AACAATGCCT ACGGCAGCAG TGATATCGTG
AAGAACGGGT ACATCGTGGC GACGCCATCG CCGTATAAGA TTCCAACCAA CGATATCCTC
GTCCAGACCG GAAAGCCGGG ATATCTCGAA CAGAACTCAA GTGCACAGTT CGTGGTCAGC
GATACCCCTG CCGCCATCAC GATCAACGGT ACCTACCATG ATCTGCCAAA AGGCGCCGTT
GTCAGGATGG TGGCCGACAG CAACCAGCCA GGGGACATCA CCATCGACCA TAACAAAATC
CTCAAGTTCG CGTTCCCGGA TATGGAGGTG TACGTGAACG GCGAACTGCT GGATGAGGGA
TCCATAGACA GCATCTACAT CCCGTTCATG ACGCAGTTCC AGACCGGCCT GAGTTATTAT
TTCGCACCCG CATCTGCGCA AACACTGGAA ACGATTAACG GTCAGAAGTA CCTTGCCAGC
CTGGATAATG CCTGGATCCG CATCGATAAC CTTGGTATCA ACAGTCAGGG AACGCTCTCC
CTGATCTCCG CAACAAACTC GACATCCATT GAAGGGACCA TGAACCAGAC CGTGCAGGAC
TGGATTCTCG GGTAA
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| Protein sequence | MKLKISIPKK KLRLPRLKKQ ARIPILIAIC VILVALGLLF HILPGPGSLA HFFEAKTSTE
SLQSVGGATT GLAEPLAPPL IADFLASPGY QSNPLSVQFF DMSRGSPGAW QWDFGDNSSS
SLQYPVHEYA SGGLYNVALT VTRQDGARET VTVDDVLDTR QATESQVLLD TIRNGAIKKG
SYLSFISDDS NSSVTVNGAR IALPAGSLVK IRAGSDSTTG TVSLRGGNIL GCSLADATLF
VNGTQVAKGS FGNCNIPSVR QYHANLTFSV EPTYGEVRQL LINGGKILAG PGNNYIVISD
DTYSPGNDLT VVAGPAYYEG TASGYSISPA LIAGFTTISP TEGPAPLNVS FIDQSAGAPV
SWSWDFGDGT GSRDKNPTHL YASPGTYDVS LTVNTADQTD TTTVQSEVIA TPPRVVANFT
ARPLTGPVPF TVRFTDQSTG FPTSWSWTFQ EAWNISFLSS GTSSPFAVST DQNPVITFTD
PGTYNVWLTV NNAYGSSDIV KNGYIVATPS PYKIPTNDIL VQTGKPGYLE QNSSAQFVVS
DTPAAITING TYHDLPKGAV VRMVADSNQP GDITIDHNKI LKFAFPDMEV YVNGELLDEG
SIDSIYIPFM TQFQTGLSYY FAPASAQTLE TINGQKYLAS LDNAWIRIDN LGINSQGTLS
LISATNSTSI EGTMNQTVQD WILG
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