Gene Mboo_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2417 
Symbol 
ID5410493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2486302 
End bp2487213 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content50% 
IMG OID640869674 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001405574 
Protein GI154151956 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAC GCGCCGACAT ACACAAGAGC ATCTTCTTTG GTATTGCCGG CATCACTGCG 
ATCCTCGTCT TTGTGATCAT CGGGTTTCTG ATCTATGCTG CCGCCCCTGT ACTGGAAACG
TCGGGGATCG GGTTTATTAC AAATTCGGTC TGGAATTACG ATACCAACCA GTATGGCATC
TTCATCTTCC TGATCGATAC CATCATCGTG ACTGCACTCA CCCTTGCCCT TGCCATTCCG
TTTGGTCTTC TCACCGCGAT GTACCTGGCA GAATGGGCAC CAGCATGGAT GGAGAAGATC
ATCCGGCCCA TTGTGGAGCT GCTTGTCGGC ATTCCCTCGG TAGTCTATGG ACTGTTTGGA
GTCCTTATCC TCTCCACGGT TTTTATGGAC TTCTTAAACC CTACTGTTGA TCATCTTCTC
GGGTTTATCC CCATCTTCAG AAATATCCAC CCAAATTTTC ACCAAGGACT CTTCCTTTCC
GCTGCCATCC TTGCCATAAT GGTAATACCC ACAATTGTTG CCCTGTCGCA GGAGGCGATG
CGGGGAGTTT CATCTGAATA TCGTGAAGCA TCCATCGCGC TCGGAGCGAC ACAGTGGGAG
ACCATGAGGA ACGTGATCCT CCCCTGCGCA TTCCCGGGTA TCGTTACAGC AGTCGTTCTT
GCAATGATGA GGGCAATGGG AGAGACCATG GCAATCGTGA TGCTCTTAGG AAATACACCC
ATAATCCCAT CATCAATTTT TGATGTCGGA TATACGATGA CCGCGAAGAT CCTCAATGAT
ATCCTGTACT ACGTCGCTTC TCCACAGCCC AGAGCCGCAA TATTCGGGAT AGCGGTTGTG
CTCTTCTTTA TGGAGATGCT GGCCGTAGCA GGTGTCCGGC TCATCTGCTC GTGGGCACAA
AGAAGGTCCT AA
 
Protein sequence
MKERADIHKS IFFGIAGITA ILVFVIIGFL IYAAAPVLET SGIGFITNSV WNYDTNQYGI 
FIFLIDTIIV TALTLALAIP FGLLTAMYLA EWAPAWMEKI IRPIVELLVG IPSVVYGLFG
VLILSTVFMD FLNPTVDHLL GFIPIFRNIH PNFHQGLFLS AAILAIMVIP TIVALSQEAM
RGVSSEYREA SIALGATQWE TMRNVILPCA FPGIVTAVVL AMMRAMGETM AIVMLLGNTP
IIPSSIFDVG YTMTAKILND ILYYVASPQP RAAIFGIAVV LFFMEMLAVA GVRLICSWAQ
RRS