Gene Mboo_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2381 
Symbol 
ID5410674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2449195 
End bp2450016 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID640869637 
ProductABC transporter related 
Protein accessionYP_001405538 
Protein GI154151920 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0184159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATC TTGAGGGGAT CACCAAGATC TACCCGCGCG GATTTCTCCG CCGGCAAAAG 
AGCGTAGCGG TCAATAATGT CACCCTCTCG ATTAAAAAAG GGGAGACGCT GGGCCTTGTC
GGGGAGAGCG GAAGCGGGAA GTCATCACTT GGACGGATCG CACTCAGGCT GATCGAGCCA
ACGAGCGGCA CGGTCCGATT TGAGGGTACC GATCTGACAA AGCTCTCCGG GAGAGAGATC
CGGAAGTTCC GGCCGCGGAT GCAGATCCTC TTCCAGGATC CCGACACCGC TCTCGATCCC
CGCATGACGG TACGGCAGAG CGTGGCAGAG CCGCTTGCGA TCTGGAACTG TATGGGAAAA
GAGGAGATGG GGGACCGGAT CGCCGGCCTG CTGGAACTGG TCGGGCTCAC CCCTGATCTT
ATCGACCGGT ACCCGTTTGA AATTTCAGGA GGTCAGAAGC AGCGGGTGGC ACTGGCCCGG
GTCCTGACCC TGAATCCCGA ATTTCTCGTT GCCGATGAAC CCACCGCAGC GCTCGACCTC
TCGGTGCAGG CGCAGGTGCT CAGCCTGATC AAAAACATCC AGAGGAAAAC AAATCTTACC
CTCCTGTTCA TCTCCCATGA TCTCCAGGTA ATCGGGCAGA TGAGCAACAG GGTTGCGGTA
ATGCACCAGG GCTCGATCGT TGAGCACGGG ACCGTTGAGG ATATCCTGAA TAATCCGCAG
GATGCCTATA CCCGGCAACT GGTTGCGGCA GCACGGGAGA GCGAGGCATG GCTGGGAAAA
ACAAGGGAGA CCCAGGGGAT TTACCAATGC AAAAAAGATT GA
 
Protein sequence
MIDLEGITKI YPRGFLRRQK SVAVNNVTLS IKKGETLGLV GESGSGKSSL GRIALRLIEP 
TSGTVRFEGT DLTKLSGREI RKFRPRMQIL FQDPDTALDP RMTVRQSVAE PLAIWNCMGK
EEMGDRIAGL LELVGLTPDL IDRYPFEISG GQKQRVALAR VLTLNPEFLV ADEPTAALDL
SVQAQVLSLI KNIQRKTNLT LLFISHDLQV IGQMSNRVAV MHQGSIVEHG TVEDILNNPQ
DAYTRQLVAA ARESEAWLGK TRETQGIYQC KKD