| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2376 |
|---|
| Symbol | |
|---|
| ID | 5410669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2443140 |
|---|
| End bp | 2443955 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640869632 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001405533 |
|---|
| Protein GI | 154151915 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000807827 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTATC TGAAACGTAT ATCGAAAAAA AATGGAGACG TGGCAGTCTC GCCGGTTATT
GGGGTGATGC TGATGCTTGT GGTGACGATC ATCATTGCGG CAGTGGTCAG CGGGTTTGCC
GGGGGATTGG TTGGGGGGAG CACCCAGAAG GCCCCGACCC TCTCCATGAA TGTGAAGATT
ATCAACATGG GGAGCTGGGT CGGGAGCGGG TTCTTTGCGA CCGTGACCGG TGTCAGCGAC
CCTATCCAGA CCAAGGATCT CAAGATCGTT ACCTCGTGGT CGACTACCAA AAAGTATGAT
CCGGGATATC CTTCAGGTTC TGTAGCGAGT AATACTGCCA TTGGTGCGAC ATTCACGGGC
GGCAACACAT CCGTTCCCCT GACCCTGAAT GCCAATCACA TGGCTGGGAC TGGCACCTAT
AATGCTATAG CACCGTTCGG GTTCGGTGCT GGCATTAATG GATCGACAAC GATCAGTGAT
GTTAACCCTA CGATGCCGAC ATTCCTGCAG AATTTCGGTA ACTATTCCCT GCAGTCGGGG
ACCAACCTCT ACGCACAGCC ATCCGGGGCC GTAAGCTGGG CCTATGTTGG TGGTGAAGCG
GGAGCAACTA GCAGTACAAA CGGTTATGGG GTAAGTTCAC CGTTTGCCTA CTCCAGCAAC
TATTTCACTT CAAGCTATGT CGATCCCACA CAGGCAGTAC TTGGTCTTGG ATGGGAGAAC
CTACGGCCCG GAGATATCGT GAATGTGCGG ATCATTCATA TCCCCAGTGG CAAAGCGATC
TTCGATAAGG ATGTCGTAGT GACAGGGGCG GCGTGA
|
|---|
| Protein sequence | MHYLKRISKK NGDVAVSPVI GVMLMLVVTI IIAAVVSGFA GGLVGGSTQK APTLSMNVKI
INMGSWVGSG FFATVTGVSD PIQTKDLKIV TSWSTTKKYD PGYPSGSVAS NTAIGATFTG
GNTSVPLTLN ANHMAGTGTY NAIAPFGFGA GINGSTTISD VNPTMPTFLQ NFGNYSLQSG
TNLYAQPSGA VSWAYVGGEA GATSSTNGYG VSSPFAYSSN YFTSSYVDPT QAVLGLGWEN
LRPGDIVNVR IIHIPSGKAI FDKDVVVTGA A
|
|---|
| |