| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2371 |
|---|
| Symbol | |
|---|
| ID | 5410664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2438971 |
|---|
| End bp | 2439657 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640869627 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001405528 |
|---|
| Protein GI | 154151910 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.621592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTGCA TTGTAGGTCC TACCGGCTCG GGAAAGAGCC GGTTTTTAGC TGACATCGAG
TCGCTTGCGC AGGGCGACAC GGTTACCGGG CGCCGTATCC TCATCAACGG TGCTCCCGTT
GCCCCATCAG CTGTACAATC CACGGGGCAG AAACTGGTGG CCCAGCTCTC GCAGCAGATG
AATTTTGTTG TGGACCTTTC CGTAGAAGAG TTCCTTTTGC TCCATGCAGA ATCCCGGCTC
AGCCCGGATC CGGACGGGAT AGTCCGGGCC ATACTTGTAG CAGCAAACAA TTTGAGCGGT
GAGAAATTTA CCGGGAGTGT ATCGGTCACC CAGCTGAGCG GCGGGCAGTC CCGGGCGCTG
ATGATTGCCG ATACTGCCCT CCTGAGCTCC TCGCCCATTG TCCTCATCGA CGAGATCGAG
AACGCTGGGA TAGACCGGAG AAAAGCGCTC GAACTTCTGG TACAAAAGGA GAAGATCACG
TTTATTGCCA CGCACGACCC CGTGCTCGCC CTCATTGGAT CCCGGCGCCT CTGGTTCCGG
GACGGCGGCA TTGCCGGGAT CATAGTGCCC GACAAACAGG AGCGGGAATC GGCAGCATAT
GTCCGGCAGA TGGATGAGCA GTGGGCCCGG TGGCGCGAGA TGATAAGGAA CGGGAAGTTA
CTTCATATCG ATCCTGACGG CAGATAA
|
|---|
| Protein sequence | MTCIVGPTGS GKSRFLADIE SLAQGDTVTG RRILINGAPV APSAVQSTGQ KLVAQLSQQM
NFVVDLSVEE FLLLHAESRL SPDPDGIVRA ILVAANNLSG EKFTGSVSVT QLSGGQSRAL
MIADTALLSS SPIVLIDEIE NAGIDRRKAL ELLVQKEKIT FIATHDPVLA LIGSRRLWFR
DGGIAGIIVP DKQERESAAY VRQMDEQWAR WREMIRNGKL LHIDPDGR
|
|---|
| |