| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2355 |
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| Symbol | |
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| ID | 5411884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2419988 |
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| End bp | 2421874 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640869611 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001405512 |
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| Protein GI | 154151894 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.692167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.583317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAC AGATAAAGAT ATCTGTCATT CTGCGACGAG TCGGTGCCGG AATCGCCGCA
AACGCCCTCC CGTATCGCTG CCCGTTTGGC CGACGTTTCC TTTGGAAACA CTATTTATAT
GAGTGTCTGC CGAACTATAA ACAGAAATAC GGGGTACCAC GCGAGGATGG ACGCATGAAG
GTTTCAGATC TTTTTACCAG ACTCCGGGAA TACCGGTCCC GGGCCGGGAT GGCCGTGAAG
GGTGCAGGTA CCCCGCAACC TTTGGCGGGA GATACCGGCA CCGCCCTGCA GTCATCCGGC
ATCCGCGAGG CGAGCTACCG GCATTATTTC CGGTTCCTTA AAGGCCGTGA TAAACTGCCA
GAGGAGGAGT ACGATCCTGC ACGGCACGGC CCGCTTGTGA AGGCCGAGAT CCCCGCCGGC
TACGATCTTC TCGACCAGTA CTGGATTGAA GAGGGCCTGA CCCTTGTGTA TATCGCTCTC
AACCGGAAGA CCAACCAGAC CGAGTACCTC CTCTTCGAAC CGCCGCTCTC GGAGTTTGAG
TACGAGCTGC TCGAACGCCT CCATGAAGAC CTCCTTGATG TCCTGATCCT GACCTCAGAT
GAGGTAAAAA CAGATCGGAA GAAAATCCTC CTCTCAAAGG TGCATGGCCT CCTCGACGAC
TATGGCCTTG TCCTTGATGA GTCCGCACAT TTCAAGATCG AATACTACCT GATCCGGAAT
TTCATCGGCT GGTCGCGTAT CGATCCGCTC ATGAAAGATC CCAACCTCGA GGATATTTCA
TGCGATGGCA GCCGGATCCC GATCTTCCTG TACCACCGGA AACACCGGAA TATCAAGACC
AACATCGCGT TCGAGGCCAC GGTCTTGAAT TCGCTTGCAA TCACCCTTGC CCAGCGTTCG
GGAAAACACA TCTCTACCGG CTCCCCCCTG CTGGATGCCA CCCTTCCGGA CGGTTCGCGG
CTCCAGCTGA CGCTCGGGAC CGAGGTAACT ACCCGGGGAA CCTCCTTTAC CATACGCAAG
TTCCGCGAAG ACCCGTTTTC TCCCATTGAG CTTATGGAGT ACGGGACATT CTCCAGCGAC
GAGCTGGTGT ACTTCTGGCT TGCCATTGAA AACGGTATGA GCCTGCTCTT TATCGGGGGA
ACTGCATCAG GGAAGACCAC ATCGCTCAAT GCAGTCTCAC TGTTTATCCC CCCCATTGCC
AAGGTGGTCA GCATCGAAGA TACGCGGGAG ATCACTCTCT ATCATGACAA CTGGATCGCT
AGCGTCACCC GCGAGGCGCT CACTGAGGGC GGCAATGCCA TCAGCATGTT CGATCTTCTC
CGGGCTGCAA TGCGGCAGCG GCCGGAGTAC ATTCTTGTCG GGGAAGTCAG GGGTCCTGAG
GCACAGACGC TTTTCCAGGC AATGAATACC GGCCACACCA CGTTCTCCAC CATGCATGCA
GGAAGCATCG ATGCGGCCAT CCACCGTCTG GAGAGCGCGC CGCTCAACGT GCCGCGTAAC
ATGGTCCAGG CATTGAACGT CATTTGTGTT CAGGCCCTCA TCTACCGCGG TACAGAAAGG
GTGCGGCGGG TCCAGGAGGT TGTCGAGATT GCCGGAATCG ATCCTGCTAC CGGGAACCTC
CGGGTCAACA ATGTCTTTCA GTACGATCCA GTCCATGACC GGACCATCTA TACGGGTCGA
TCCCAGATTT ACAGCATGAT CGCCACAAAA CGAGGATGGA CACGGGAAGA ACTCGATTAT
GAGATCACCG TAAGGAAAAG CCTCCTCGAT GCCATGCATG CGCAGGGGAT CCGCGACTAC
ATATCAGTTG CCTCACTCTT CCATAATTAT AATATCAACC GTGCGGACGT ACTCGCCCAC
AACGACGATC TCAGACAGGT ACTCTGA
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| Protein sequence | MGAQIKISVI LRRVGAGIAA NALPYRCPFG RRFLWKHYLY ECLPNYKQKY GVPREDGRMK
VSDLFTRLRE YRSRAGMAVK GAGTPQPLAG DTGTALQSSG IREASYRHYF RFLKGRDKLP
EEEYDPARHG PLVKAEIPAG YDLLDQYWIE EGLTLVYIAL NRKTNQTEYL LFEPPLSEFE
YELLERLHED LLDVLILTSD EVKTDRKKIL LSKVHGLLDD YGLVLDESAH FKIEYYLIRN
FIGWSRIDPL MKDPNLEDIS CDGSRIPIFL YHRKHRNIKT NIAFEATVLN SLAITLAQRS
GKHISTGSPL LDATLPDGSR LQLTLGTEVT TRGTSFTIRK FREDPFSPIE LMEYGTFSSD
ELVYFWLAIE NGMSLLFIGG TASGKTTSLN AVSLFIPPIA KVVSIEDTRE ITLYHDNWIA
SVTREALTEG GNAISMFDLL RAAMRQRPEY ILVGEVRGPE AQTLFQAMNT GHTTFSTMHA
GSIDAAIHRL ESAPLNVPRN MVQALNVICV QALIYRGTER VRRVQEVVEI AGIDPATGNL
RVNNVFQYDP VHDRTIYTGR SQIYSMIATK RGWTREELDY EITVRKSLLD AMHAQGIRDY
ISVASLFHNY NINRADVLAH NDDLRQVL
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