Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2355 |
Symbol | |
ID | 5411884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2419988 |
End bp | 2421874 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640869611 |
Product | type II secretion system protein E |
Protein accession | YP_001405512 |
Protein GI | 154151894 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.692167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.583317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAC AGATAAAGAT ATCTGTCATT CTGCGACGAG TCGGTGCCGG AATCGCCGCA AACGCCCTCC CGTATCGCTG CCCGTTTGGC CGACGTTTCC TTTGGAAACA CTATTTATAT GAGTGTCTGC CGAACTATAA ACAGAAATAC GGGGTACCAC GCGAGGATGG ACGCATGAAG GTTTCAGATC TTTTTACCAG ACTCCGGGAA TACCGGTCCC GGGCCGGGAT GGCCGTGAAG GGTGCAGGTA CCCCGCAACC TTTGGCGGGA GATACCGGCA CCGCCCTGCA GTCATCCGGC ATCCGCGAGG CGAGCTACCG GCATTATTTC CGGTTCCTTA AAGGCCGTGA TAAACTGCCA GAGGAGGAGT ACGATCCTGC ACGGCACGGC CCGCTTGTGA AGGCCGAGAT CCCCGCCGGC TACGATCTTC TCGACCAGTA CTGGATTGAA GAGGGCCTGA CCCTTGTGTA TATCGCTCTC AACCGGAAGA CCAACCAGAC CGAGTACCTC CTCTTCGAAC CGCCGCTCTC GGAGTTTGAG TACGAGCTGC TCGAACGCCT CCATGAAGAC CTCCTTGATG TCCTGATCCT GACCTCAGAT GAGGTAAAAA CAGATCGGAA GAAAATCCTC CTCTCAAAGG TGCATGGCCT CCTCGACGAC TATGGCCTTG TCCTTGATGA GTCCGCACAT TTCAAGATCG AATACTACCT GATCCGGAAT TTCATCGGCT GGTCGCGTAT CGATCCGCTC ATGAAAGATC CCAACCTCGA GGATATTTCA TGCGATGGCA GCCGGATCCC GATCTTCCTG TACCACCGGA AACACCGGAA TATCAAGACC AACATCGCGT TCGAGGCCAC GGTCTTGAAT TCGCTTGCAA TCACCCTTGC CCAGCGTTCG GGAAAACACA TCTCTACCGG CTCCCCCCTG CTGGATGCCA CCCTTCCGGA CGGTTCGCGG CTCCAGCTGA CGCTCGGGAC CGAGGTAACT ACCCGGGGAA CCTCCTTTAC CATACGCAAG TTCCGCGAAG ACCCGTTTTC TCCCATTGAG CTTATGGAGT ACGGGACATT CTCCAGCGAC GAGCTGGTGT ACTTCTGGCT TGCCATTGAA AACGGTATGA GCCTGCTCTT TATCGGGGGA ACTGCATCAG GGAAGACCAC ATCGCTCAAT GCAGTCTCAC TGTTTATCCC CCCCATTGCC AAGGTGGTCA GCATCGAAGA TACGCGGGAG ATCACTCTCT ATCATGACAA CTGGATCGCT AGCGTCACCC GCGAGGCGCT CACTGAGGGC GGCAATGCCA TCAGCATGTT CGATCTTCTC CGGGCTGCAA TGCGGCAGCG GCCGGAGTAC ATTCTTGTCG GGGAAGTCAG GGGTCCTGAG GCACAGACGC TTTTCCAGGC AATGAATACC GGCCACACCA CGTTCTCCAC CATGCATGCA GGAAGCATCG ATGCGGCCAT CCACCGTCTG GAGAGCGCGC CGCTCAACGT GCCGCGTAAC ATGGTCCAGG CATTGAACGT CATTTGTGTT CAGGCCCTCA TCTACCGCGG TACAGAAAGG GTGCGGCGGG TCCAGGAGGT TGTCGAGATT GCCGGAATCG ATCCTGCTAC CGGGAACCTC CGGGTCAACA ATGTCTTTCA GTACGATCCA GTCCATGACC GGACCATCTA TACGGGTCGA TCCCAGATTT ACAGCATGAT CGCCACAAAA CGAGGATGGA CACGGGAAGA ACTCGATTAT GAGATCACCG TAAGGAAAAG CCTCCTCGAT GCCATGCATG CGCAGGGGAT CCGCGACTAC ATATCAGTTG CCTCACTCTT CCATAATTAT AATATCAACC GTGCGGACGT ACTCGCCCAC AACGACGATC TCAGACAGGT ACTCTGA
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Protein sequence | MGAQIKISVI LRRVGAGIAA NALPYRCPFG RRFLWKHYLY ECLPNYKQKY GVPREDGRMK VSDLFTRLRE YRSRAGMAVK GAGTPQPLAG DTGTALQSSG IREASYRHYF RFLKGRDKLP EEEYDPARHG PLVKAEIPAG YDLLDQYWIE EGLTLVYIAL NRKTNQTEYL LFEPPLSEFE YELLERLHED LLDVLILTSD EVKTDRKKIL LSKVHGLLDD YGLVLDESAH FKIEYYLIRN FIGWSRIDPL MKDPNLEDIS CDGSRIPIFL YHRKHRNIKT NIAFEATVLN SLAITLAQRS GKHISTGSPL LDATLPDGSR LQLTLGTEVT TRGTSFTIRK FREDPFSPIE LMEYGTFSSD ELVYFWLAIE NGMSLLFIGG TASGKTTSLN AVSLFIPPIA KVVSIEDTRE ITLYHDNWIA SVTREALTEG GNAISMFDLL RAAMRQRPEY ILVGEVRGPE AQTLFQAMNT GHTTFSTMHA GSIDAAIHRL ESAPLNVPRN MVQALNVICV QALIYRGTER VRRVQEVVEI AGIDPATGNL RVNNVFQYDP VHDRTIYTGR SQIYSMIATK RGWTREELDY EITVRKSLLD AMHAQGIRDY ISVASLFHNY NINRADVLAH NDDLRQVL
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