| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2354 |
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| Symbol | |
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| ID | 5411883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2418030 |
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| End bp | 2419988 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640869610 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001405511 |
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| Protein GI | 154151893 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.149954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.434022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCC GGCACTCCCT CCAGAAATGG CTGCTGCGCG ACCCGATCCG GTACCACAGC
GTCCATGCTG ACCTGGTCTC GTCGCGTTCC GGCCTGACGC TCGAGCAGTA CCTCTGGAAG
TCTGTGAGGA TCTCGGTTGT TTCCGGTATC ATCTTTGCGA TCCTCGGGTA CATCGTGAGT
GAGTTTTTTG CCCAGGAGGT CCGGTCCGGG AGAGGAGTCT ATAACGTTCT CAACCTCCAG
CTCCCTGAAA GTCTTGCGTT CCTTTCCAGT CCCACGGTAG TAGTCTCGGT CAGTGTTGCA
GTCTCTTTTG CTTTTGGGGC GTACATCGCC TACCTTCTCC TGCTCCGCCT CCCCCACATC
GAGAAGAACA ACCGGAGTAT CAAGATCAAC CTGACGCTGC ACAACGCTGT TGCCTATATG
TACGCAATGC GCCGGGGCGG GGCTGAGCTG ATGTCGATCT TTTACGCCCT CTCCGAGAAC
GCCCCCATCT ATGGGGAAGT GGCGCTCGAG TTCCGGCAGA TCACCCGGGA TGTGGACTAT
TTCGGCTCTG ATATGCTCAC CGCCATGCGG CATCTCTCCA GTACCACACC CTCTGCAAAG
CTCAAGGATT TTCTCGAAGA TCTTCTCTCG GTGATCGAGA GCGGGGGGGA TCTCTCGGAA
TTCCTCGCGA GCCGGGTGAG GCTGTACCAG GAAGAGGCCC GGTTTGAGCA GAAACAGTTC
CTGACCCTCC TTTCCATGGT TGCCGAGTCG TACGTGACCC TCTTTGTTGC CGGCCCGCTT
TTTCTGATCA TCATCATGGT GGTCATGGGC ATGATGGGGG GTTCTGCCGT TCTCCAGCTC
TCCCTGGTAG TCTATGCGAT CATGCCGATC GGGTCGTTTA TCTTTATCCT GCTCATTGAC
GTTGTATCGG GAAGAGCGGA GAAGGCCGAG AGGTATACAC GGGTAAAGGA GCTCAACACG
TATTCGGATG TCTTACGGGA GAAAAAGGGA GGGGAGGAAC CTCTCTTTGA CCAGCTCCAT
ATGTACGACA AGGTCCGGAC GCTCACCCAT TACATCCGTC ATCCCTTTGA GAGTTTTGTC
AACGATGTCA ACCATACCCT CTACATCACC GTCCCGATAG CGATACTCTA CATCGTACTG
GTGTTACTGA ATATCCCGTA CTATGCGGAT CCGGAAATCT TCATGGAGGT GATGAACGCT
CATCTCGTGA TTGCCCTTTT GATCGTCCTT ATTCCCTACG CCATATTTTA TGAGATCTGG
TCTCACAAGG TCAAGGGGAT CCAGTCAATG ATCCCGGATT TCCTGGAGCG GATGGCCGGG
ATCAACCGGG TCGGCCTCAC GATTGCACAG GCAATCGGGA TTATGGTCAA CACAAACCTT
GGCCTTCTCA GCTACGAGAT CCGGCGGATA AAAAGGGACA TGGACTGGGG TGCGAACTTT
TCCGAGGCGC TGATGCGCTT TGAGCAGCGG ATCAGCACCG CGTCCATTGC CCGGACCGTG
ACCCTCATCA CCAAGGCAAG CGAGATGACC GGGCAGATCG GCGAGGTGCT TGCGATTGCC
GCAAGCGATG CAAAGATGAG CGAGACCCTC AAAAAAGAGC GCCTTGCCGA GATGTTCATC
TATACGGCGA TCGTATACCT CTCGTTCTTC GTTTTCCTCT TTGTCGTTGC CGTTCTCTCT
ACACAGTTCC TGCCGGTACT TGCCCATATC GGGACCGCGG GGATTTCGGG ATCAGGCCCG
CTCTCCGGTC TTGGGTCAGT ACCGGTCAAA TCCTTTGACC GGCTCCTCTA CCATGCCTGC
CTGATCCAGG CGCTCTTCTC GGGTCTGATC GCCGGCCAGA TGGGCGAGGC CTCGCTCGCC
GCCGGGGTCA AGCACTCCTG TGTCCTCCTG ATCATTGCCC TTGTTGTCTT TACCTTCTTT
ATCGCCGTAT ACCCGGACCG GCCGGGCATT CACGGGTAA
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| Protein sequence | MNFRHSLQKW LLRDPIRYHS VHADLVSSRS GLTLEQYLWK SVRISVVSGI IFAILGYIVS
EFFAQEVRSG RGVYNVLNLQ LPESLAFLSS PTVVVSVSVA VSFAFGAYIA YLLLLRLPHI
EKNNRSIKIN LTLHNAVAYM YAMRRGGAEL MSIFYALSEN APIYGEVALE FRQITRDVDY
FGSDMLTAMR HLSSTTPSAK LKDFLEDLLS VIESGGDLSE FLASRVRLYQ EEARFEQKQF
LTLLSMVAES YVTLFVAGPL FLIIIMVVMG MMGGSAVLQL SLVVYAIMPI GSFIFILLID
VVSGRAEKAE RYTRVKELNT YSDVLREKKG GEEPLFDQLH MYDKVRTLTH YIRHPFESFV
NDVNHTLYIT VPIAILYIVL VLLNIPYYAD PEIFMEVMNA HLVIALLIVL IPYAIFYEIW
SHKVKGIQSM IPDFLERMAG INRVGLTIAQ AIGIMVNTNL GLLSYEIRRI KRDMDWGANF
SEALMRFEQR ISTASIARTV TLITKASEMT GQIGEVLAIA ASDAKMSETL KKERLAEMFI
YTAIVYLSFF VFLFVVAVLS TQFLPVLAHI GTAGISGSGP LSGLGSVPVK SFDRLLYHAC
LIQALFSGLI AGQMGEASLA AGVKHSCVLL IIALVVFTFF IAVYPDRPGI HG
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