| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2350 |
|---|
| Symbol | |
|---|
| ID | 5411879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2414941 |
|---|
| End bp | 2416917 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640869606 |
|---|
| Product | V-type ATP synthase subunit I |
|---|
| Protein accession | YP_001405507 |
|---|
| Protein GI | 154151889 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.356369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCGC CTAAACCGAT GAGCCGGGTG CTTATCGTTG CATCCCGGGA CCAGGCGGAA
CCGATTATCG GGGAACTCTA CCGCGAGCAC CTGTTCCATA TCGAAGATTA CGTGGAGCAG
GGACGCGAAG GGTACGAGGG CTTTAAGATC GGAAATCCGC TTCCCGGGGC TACAGAAGCA
TCGCAGGAGC TTGTCAAGGT CAGGGCAATT GAGAACGTCT TTTCTGTCCG CGGCGAAGAT
ATCGACGCAA AACAGAAACT GAGTGCACCC GAGATCCGGC AGAAGATCGA AAAGGATCTC
CCGGGTATCG AAAAAGAGGT CGAGGACCTG GCAGCGGCCC GGTCGAAACT CGATACGAAG
GCAAAGGAGT ACGAGCAGAA GATCCAAGAG CTTGCTCCCT TCAGGGACAC TTCGCTCGAT
CTTGCTCTTT TGCGCAACAC TGCGCATTTT TCCGTGCTGG CCGGTTACGC CCCAAAGGAC
GTGGTACTTT CTGTCCCGCA CGAGATTGAG ACTGTTGTAA AAGGCAAGGA CCGGGTATTT
GTCATTGCCG TGGTTGCGGC AAAAGACCGT GCACAGGCAG AACGCGAGCT CCAGGAAGCG
CAGTTCCAGT CGGTTGGGAT CCCGGAAGAG AGCGGCACAG CAACGGTCCG CACCGCGTAT
TACACGGAGC AGATCACCTC GCTCAAAAAA GAGACTGAAG GGGTTAATGC AAAACTCGCA
CAGATCCGGG AATCGCACGC CGATCTCCTG GTTGCCTGCG AGGAGGCATT CCGGGCAAAG
ATCGAACAGA CCGAGGCACC GTTGAGGTTT GCTACGACCG CAAAAGCGTT CGTGGCTGAA
GGATGGGTTC CCGCGGATCG TACCGCAGGG CTCTTTGCCG CCCTTGACAA GGTGACCGGC
GGCAGGGTCT TTGTCTCAGA ACAGCCTATC GATCTCGCGC ACGACACCGT GCCTGTGGAG
TACAACAACC CGGAGTTCGC AAAGCCTGCG CAGCTGCTCA TGGATGTCTA CTCCCGCCCG
ACGTATACGG AAGTAGACCC GACGCTTCTC TTGTCGATCA TGTTCCCGAT CTTCTTTGGG
GTGATCGTGG GTGATGTCGG GTACGGCCTT CTGATGCTTG CACTGTGTGT TGGCCTCTGG
AAGTTCATGA AAGGCGACGA GGCCAGGCAG TTCCTGAAAA TTCTCCGGAA CGCGAGCATC
ATGAGCATCT TCTTCGGGCT CTTGTTCAGT GAATTTTTGG GATTCGAGCT CCCGTGGGCC
CCGATCATCT ACAGCCGCCA CTTAAACATC GGCGTAACTG AAGCCGGGGG GCAGGGGGCA
GCGATCGCCC AGCTCTTAAT CGTCTCGGTC TGGGTCGGTA TCCTGTATGT CACGCTCGGC
AGGGCGCTTG GCATGGTCAA CCACGCCCGC CAGGACCATG GCGACCACCG CATAAAAGCC
GTGCTTGCAA ACTTCGGCTG GATAACCGTT ATGTGGGGAA TCCTCATTGC CATCTGGTCG
ATGTTCCCGA TCCCGCTCAT GCCGGATCTC ACCGGGCTTC CCATCGTGGC GGTGGGGCTC
TCTGTCGGTA TGGTTGTCGC GATCATCTTT ATTGTAATGG GTGTCATTTT CATAGCACGC
GATGCGGTCC TCGAGATCAT CGAGATCCCG ACGATCATCT CGCACGTGCT CTCGTATACC
CGTCTGACAG CGGTGGGGCT GTCATCGGTT GCCATCGCGA TGGTGGTCAA CTACATGTCT
ATCGGGATGT TCATCAATCC CGGTATGAAG GATCTCTCCA TTGTCGGAAT TGTCATGATC
GTTATCGGGG TTTTGATCTT CCTCCTGGGG CACGCATTCA ACCTTGCCCT GGGACTCCTC
GACGGCGGTC TTCACTCAAT CCGGTTGCAT TATGTCGAAT TCTTCACCAA GTTCTACAAG
GGTGGAGGCA GGAAATACAA TCCATTTGGA ATGAAAAGGA AATTTACGGA GGACTAG
|
|---|
| Protein sequence | MLAPKPMSRV LIVASRDQAE PIIGELYREH LFHIEDYVEQ GREGYEGFKI GNPLPGATEA
SQELVKVRAI ENVFSVRGED IDAKQKLSAP EIRQKIEKDL PGIEKEVEDL AAARSKLDTK
AKEYEQKIQE LAPFRDTSLD LALLRNTAHF SVLAGYAPKD VVLSVPHEIE TVVKGKDRVF
VIAVVAAKDR AQAERELQEA QFQSVGIPEE SGTATVRTAY YTEQITSLKK ETEGVNAKLA
QIRESHADLL VACEEAFRAK IEQTEAPLRF ATTAKAFVAE GWVPADRTAG LFAALDKVTG
GRVFVSEQPI DLAHDTVPVE YNNPEFAKPA QLLMDVYSRP TYTEVDPTLL LSIMFPIFFG
VIVGDVGYGL LMLALCVGLW KFMKGDEARQ FLKILRNASI MSIFFGLLFS EFLGFELPWA
PIIYSRHLNI GVTEAGGQGA AIAQLLIVSV WVGILYVTLG RALGMVNHAR QDHGDHRIKA
VLANFGWITV MWGILIAIWS MFPIPLMPDL TGLPIVAVGL SVGMVVAIIF IVMGVIFIAR
DAVLEIIEIP TIISHVLSYT RLTAVGLSSV AIAMVVNYMS IGMFINPGMK DLSIVGIVMI
VIGVLIFLLG HAFNLALGLL DGGLHSIRLH YVEFFTKFYK GGGRKYNPFG MKRKFTED
|
|---|
| |