Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2338 |
Symbol | |
ID | 5411031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2404839 |
End bp | 2405555 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640869594 |
Product | Type II site-specific deoxyribonuclease |
Protein accession | YP_001405495 |
Protein GI | 154151877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.785868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.448152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAA AGATTGTTAA TGCTGTTCGG TCCTACCGGA CTATCCGGAA GAGACAGATT ACAAAACAGA CGGAGTCTGG AAGACACGAT CAGGGAACCC GCGGTGCGGC AACCGGCGGG GCACAGATGG ACGCCTTTGC CGATCTCATC TGTTCGGCAA TCACAGAGGC CGGGATTCCT GAATCGGCTA TTTTCCAAAA AACTGCTGTA GAACTGCCGG GCTACTACCG GCCGGAAAAG AAATGGGATA TTGTGGTAGT CCAGAAGGGT GTGCTTGGCG CAGTCATTGA ACTGAAATCC CAGATGGGCC CGTCGTTTGG AAATAATTTC AATAACCGAA GCGAGGAGGC ACTCGGGAGT GCCACGGATA TCTGGGTCGC ATTCCGGGAG AAACGATTCG GGAGCCGGAT GTTCCGACCG TGGCTGGGGT ACCTTTTCCT TCTAGAGGAC TGCCCGGAAT CGACCGCCCC GGTTGCGGTT CGGGAGCCAC ACTTTGCCAT CGATGAAATA TTCAGGGATG CTTCGTACAA AAAACGGTAC GAGATCCTCT GCGAGAGGCT TATTCTCGAA CGGCTCTATG AATCGTCCTG TTTTATTACA GCCCGGTTTG AAAGTACAGA TATCCATGTC GATGAACCCA ATCCGAACCT GTCATTCGAG CATTTTATTG GTTCGCTTAA AGGTCATATG CAGATGCTCA GTAACCAGAT GAAATAA
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Protein sequence | MDEKIVNAVR SYRTIRKRQI TKQTESGRHD QGTRGAATGG AQMDAFADLI CSAITEAGIP ESAIFQKTAV ELPGYYRPEK KWDIVVVQKG VLGAVIELKS QMGPSFGNNF NNRSEEALGS ATDIWVAFRE KRFGSRMFRP WLGYLFLLED CPESTAPVAV REPHFAIDEI FRDASYKKRY EILCERLILE RLYESSCFIT ARFESTDIHV DEPNPNLSFE HFIGSLKGHM QMLSNQMK
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