Gene Mboo_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2338 
Symbol 
ID5411031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2404839 
End bp2405555 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID640869594 
ProductType II site-specific deoxyribonuclease 
Protein accessionYP_001405495 
Protein GI154151877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.785868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.448152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA AGATTGTTAA TGCTGTTCGG TCCTACCGGA CTATCCGGAA GAGACAGATT 
ACAAAACAGA CGGAGTCTGG AAGACACGAT CAGGGAACCC GCGGTGCGGC AACCGGCGGG
GCACAGATGG ACGCCTTTGC CGATCTCATC TGTTCGGCAA TCACAGAGGC CGGGATTCCT
GAATCGGCTA TTTTCCAAAA AACTGCTGTA GAACTGCCGG GCTACTACCG GCCGGAAAAG
AAATGGGATA TTGTGGTAGT CCAGAAGGGT GTGCTTGGCG CAGTCATTGA ACTGAAATCC
CAGATGGGCC CGTCGTTTGG AAATAATTTC AATAACCGAA GCGAGGAGGC ACTCGGGAGT
GCCACGGATA TCTGGGTCGC ATTCCGGGAG AAACGATTCG GGAGCCGGAT GTTCCGACCG
TGGCTGGGGT ACCTTTTCCT TCTAGAGGAC TGCCCGGAAT CGACCGCCCC GGTTGCGGTT
CGGGAGCCAC ACTTTGCCAT CGATGAAATA TTCAGGGATG CTTCGTACAA AAAACGGTAC
GAGATCCTCT GCGAGAGGCT TATTCTCGAA CGGCTCTATG AATCGTCCTG TTTTATTACA
GCCCGGTTTG AAAGTACAGA TATCCATGTC GATGAACCCA ATCCGAACCT GTCATTCGAG
CATTTTATTG GTTCGCTTAA AGGTCATATG CAGATGCTCA GTAACCAGAT GAAATAA
 
Protein sequence
MDEKIVNAVR SYRTIRKRQI TKQTESGRHD QGTRGAATGG AQMDAFADLI CSAITEAGIP 
ESAIFQKTAV ELPGYYRPEK KWDIVVVQKG VLGAVIELKS QMGPSFGNNF NNRSEEALGS
ATDIWVAFRE KRFGSRMFRP WLGYLFLLED CPESTAPVAV REPHFAIDEI FRDASYKKRY
EILCERLILE RLYESSCFIT ARFESTDIHV DEPNPNLSFE HFIGSLKGHM QMLSNQMK