Gene Mboo_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2315 
Symbol 
ID5409814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2381867 
End bp2382292 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content55% 
IMG OID640869570 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001405472 
Protein GI154151854 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.791717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTTG TCAAAGTTGC AAAAGCAGAT GAGATTGTGC CCGGTGCCAT GAAACACGTG 
GAGATCGGGG AGACAGAGAT CTGCATCGTA AATGTTGAGG GTGTGTTTTA TGCAATCGGG
GACCGGTGCG GCCATGAGAA TGCCCGGATG TCCCGCGGCT CCCTGATGGG AACGATCGTC
ACCTGCCCCA TGCATGCCTC GCAGTTTGAC GTAACCACCG GGAAACTGAT GTCCGGGCCG
GTCCTGGAAC TCGACGGGAT CGCAGAGAAG TTTTCCGGCT GCCCCGAGAA CGTGAGAAAA
TCGGTGGGAG AGATGTTTGC CGGTATCGTA GAAGAACAGC GCCTGATCAA GACCTACGAT
CTTCCCGTCT ACAACGTCAA ACACGAGGGC AGCAATATCC TCGTCGACAT CAGCGCCGGC
AGGTAA
 
Protein sequence
MGFVKVAKAD EIVPGAMKHV EIGETEICIV NVEGVFYAIG DRCGHENARM SRGSLMGTIV 
TCPMHASQFD VTTGKLMSGP VLELDGIAEK FSGCPENVRK SVGEMFAGIV EEQRLIKTYD
LPVYNVKHEG SNILVDISAG R