Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2311 |
Symbol | tfb |
ID | 5409810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2378490 |
End bp | 2379494 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640869565 |
Product | transcription initiation factor IIB |
Protein accession | YP_001405468 |
Protein GI | 154151850 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.969841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAG TAGAAAAACT CAAACTTCTC CAGAGTGAGC GGGAAGCGCT CAAATCGCGT ATAAAAGTCA AGGAACAGGA AAAGAAAGCG GAGAACCACA CCGAGACAGT CTGCCCGGAG TGCGGCGGCA GGCAGCTGGT GCACGATTAC GAACGTGCGG AGCTGGTCTG CCAGAGCTGC GGGCTTGTTA TCGATGACGA TTTCATCGAC CGGGGCCCGG AGTGGCGTGC GTTCGACCAC GACCAGCGCA TGAAGAGGTC GCGTGTCGGC GCTCCGATGA CCTTTACGAT CCATGATAAG GGTCTCTCCA CCATGATCGA CTGGAGGAAC CGGGACAGTT ATGGCCGGGC CATCTCCTCG AAAAACCGCG CCCAGCTCTA CCGCCTCCGC AAGTGGCAGC GCCGGATCCG TGTCAGCAAT GCGACGGAGA GGAATCTTGC GTTCGCACTC TCCGAGCTGG ACCGTATGGC CTCGGCCCTT GGTCTCCCCA GAAACGTCCG TGAGACCGCG GCCGTGGTGT ACCGTGATGC TGTGGACAAG AACCTGATCC GTGGCCGGAG CATTGAAGGC GTTGCGGCGG CTGCACTCTA TGCTGCATGC CGGCAGTGCA GCGTGCCCCG TACGCTCGAT GAGATCGCAG AAGTGTCGCG TGTCTCACGA AAAGAGATCG GCAGGACGTA CCGGTTTATC TCCCGTGAAC TGGGCTTAAA GCTCCTCCCG ACCTCGCCCA TCGATTACGT GCCCCGGTTC TGCTCCGGTC TCACCCTCAA GGGCGAGGTC CAGAGCCGGG CAGTCGAGAT CCTGCGCCAG GCCGGCGAGA GGGAACTCAC GAGCGGCCGC GGACCGACCG GTGTTGCGGC AGCTGCAATC TACATCTCCT CCATCCTTGG CGGCGAGCGG CGCACCCAGC GCGAAGTAGC GGAGGTGGCC GGGGTAACCG AAGTTACCAT CCGGAACAGG TACAAGGAAC TGGCAGAGAA GCTCGACATC GAGATCATCC TCTGA
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Protein sequence | MQEVEKLKLL QSEREALKSR IKVKEQEKKA ENHTETVCPE CGGRQLVHDY ERAELVCQSC GLVIDDDFID RGPEWRAFDH DQRMKRSRVG APMTFTIHDK GLSTMIDWRN RDSYGRAISS KNRAQLYRLR KWQRRIRVSN ATERNLAFAL SELDRMASAL GLPRNVRETA AVVYRDAVDK NLIRGRSIEG VAAAALYAAC RQCSVPRTLD EIAEVSRVSR KEIGRTYRFI SRELGLKLLP TSPIDYVPRF CSGLTLKGEV QSRAVEILRQ AGERELTSGR GPTGVAAAAI YISSILGGER RTQREVAEVA GVTEVTIRNR YKELAEKLDI EIIL
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