Gene Mboo_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2298 
Symbol 
ID5411253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2368722 
End bp2370233 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content36% 
IMG OID640869552 
Producthypothetical protein 
Protein accessionYP_001405455 
Protein GI154151837 
COG category 
COG ID 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TGTTGGATAC TAATATTATT TTACACCGTG AAGGGAAAAA TCCCATCAAT 
CCAGATATTG GGAAATTATT TTCCTGGATC GACCGGCTAG GTTATCAAAA ATGTGTACAC
CAGATTACTG TTGATGAAAT AAAAAAAATT CAAGATCAAA AAGTCCGTAC CGCTTTTTTG
GTGAAACTGG AAAGTTATCA CATCCTTCCT ACTGTTGCAC CAATTCATAC CGATGTAAAA
AAAGTATCCG ATCATTGGGA TACCAAATCC AATGATTTAA ACGATACTCT ACTTCTAAAT
GAAGTCTATG CAGGTCGAGT TGATCTTCTA CTAACGGAAG ATAAGAAAAT TCATAAAAAA
GCCAGTGATC TGGGGATTAA TGGCAAGATC TTTACCATTG ATTCATTATT AGAGAAATTA
ACGTCAGAAA ATCCCGATTT TGTAGATTAT AAGGTTCTAG CCATAAAAAA AGAGTTCTTT
GGGAACATAG ATATCACAGA TGAATTTTTT AATAGTCTGC GAGAGGATTA TTCGGATTTT
AATGAGTGGT TTAATCGGAA ATCTGACGAA ATCGCGTATG TTTGTATGTT GGAGAAAAAA
GTCCTGGCCT TTCTCTACAT GAAGGTTGAA ACCGAAAAAG AGTCCTATAG CGATATTACA
CCGATATTTA AACCAAATAA ACGGTTGAAA ATTGGTACCT TCAAAGTGAA ACTAAATGGC
TATATTTTGG GAGAGCGCTT CCTAAAAATT ATATTTGATA ATGCGTTACA CCAGTCCGTC
AAAGAAATCT ATGTTACAAT TTTCCCCAAA CGCCCCGAGC AAGAAAGGCT CATTCAGTTA
CTTACTGATT TTGGATTCAC ACCTCATGGA ATTAAAACAT CTAAATACGG TGAGGAACTG
GTATATGTCA GGGATTTTTC ACCTAAAGTA TCCCTCAATA CTCCTAAAAC AACATATCCC
TACCTATCTA AAAACGCAAG AAAATTTATT GTTCCAATTT ATCCGGCCTA TCACACGAGC
CTACTTCCTG ACTCCATTCT TCAAAGAGAA TCTCCAGCGG ATTTTATTGA AAATGAACCT
CACAGAAATG CTATCTCCAA AGTTTATATT TCGCGGTCCT ATCGCAAAGA TTTGCAATCC
GGTGATGTAA TTATTTTTTA CAGAACTGGT GGATACCATC AATCAGTAAT CACGACTATT
GGAATCGTGG AAAACGTCCA TAAAAATATT CAAAGTTTAG AGGATTTTGT TTGGATTTGC
AGAAAAAGGA GCGTGTTTTC TGCAAATGAG TTGAAAGAGC AGTGGGATAA ATACCCAACC
ATTCGGCCAT TCGTAGTAAA TTTTCTCTAT GCGTATTCAT TCCCTAAACG ACTCACTTTG
CAACGCCTTA TTCAGTTGGG AATTATTACC GATATTCATT CTGCACCTCG GGGATTTGAA
CTAATCTCTG AAGAGGCATT CGAAAAGATA GTTTTGGAGA CAGGAACCGA TGGCCATATT
ATTATCAATT AA
 
Protein sequence
MKLLLDTNII LHREGKNPIN PDIGKLFSWI DRLGYQKCVH QITVDEIKKI QDQKVRTAFL 
VKLESYHILP TVAPIHTDVK KVSDHWDTKS NDLNDTLLLN EVYAGRVDLL LTEDKKIHKK
ASDLGINGKI FTIDSLLEKL TSENPDFVDY KVLAIKKEFF GNIDITDEFF NSLREDYSDF
NEWFNRKSDE IAYVCMLEKK VLAFLYMKVE TEKESYSDIT PIFKPNKRLK IGTFKVKLNG
YILGERFLKI IFDNALHQSV KEIYVTIFPK RPEQERLIQL LTDFGFTPHG IKTSKYGEEL
VYVRDFSPKV SLNTPKTTYP YLSKNARKFI VPIYPAYHTS LLPDSILQRE SPADFIENEP
HRNAISKVYI SRSYRKDLQS GDVIIFYRTG GYHQSVITTI GIVENVHKNI QSLEDFVWIC
RKRSVFSANE LKEQWDKYPT IRPFVVNFLY AYSFPKRLTL QRLIQLGIIT DIHSAPRGFE
LISEEAFEKI VLETGTDGHI IIN