Gene Mboo_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2269 
SymbolileS 
ID5411001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2336598 
End bp2339828 
Gene Length3231 bp 
Protein Length1076 aa 
Translation table11 
GC content57% 
IMG OID640869521 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001405426 
Protein GI154151808 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.585384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.126832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGAAG TTACCGCAAA CTTTTCCGCG AAAGATATCG AGCGTGAGGT GCAGGAGTAC 
TGGCGCACTC ACGATACCTA CAAGGCAGTA AAAGAGCAGC ACAGTGCCGG CAGGGCATTC
TTCTTTGTCG ACGGCCCGCC ATACACCACC GGTCAGATCC ACCTTGGTAC CGCGTGGAAC
AAAATTATAA AAGACTCGAT CCTCCGCTAC CACCGGATGA ACGGCAGGAA TGTGATCGAC
CGTGCGGGCT ACGATATGCA TGGCCTTCCT ATCGAAGTGA AAGTCGAGCA AAAACTCGGC
TTTGCCTCCA AAAAGGATAT CGAGACATTC GGGATTGAAA AGTTTATCAA CGAGTGCCGG
GAGTTCGCGA TAAAGAACAA GGAACTCATG GACGCCCAGT TCGAGAACCT CGGGATCTGG
ATGGATTTCA AAAACGCGTA CCAGACGATC AAGCCATGGT ATGTGGAAGC AGCGTGGTGG
ACGCTGGCGA AAGCACAGGA GAAGGGGATG CTTGAGCGCG GGTACCGGGT CGTGAACTGG
TGCCCCCGGT GCGAGACGGC GATTGCGGAC GCCGAAGTCG AGTACTGGGA CGAGACCGAC
CCCTCGGTCT TTGTCAAGTT CCCGATCAGG GGTAAGGTAA GCGAGTCGCT TGTGATCTGG
ACGACAACTC CCTGGACCCT TCCCGCCAAC GTAGCGGTCG CGGTGGGAAA AGAATTTGTC
TACGCACGGG TTCACGCCGA GAAGAACGGG CGCGAGGAAT ACCTCTGGGT GGCAGAGGAT
CTCGTAAAAT CCGTGCTCAA GAAAGGGCGG TACCAGAAGT TCGAGACGTT AGAGACCAAA
AAAGGCGCTG AACTCATCGG CTGGGAGTAC GACTCCCCGC TCATGGATGT GGTTCCGATC
CAGAAGGAGA TCGCCCACCG GGTTGTTGCT GCGGACTTTG TTGCAATGGA GAACACCGGC
ATGGTGCATA TTGCCCCGGG CCACGGTTGG GACGACTACG TGCTCGGGAC AAAAGAGAAA
CTCGCCATTG TCTGCCCGGT GGACGGGGCA GGAAAGTTCC GGCCCGAAAC GGGGATCTTT
GCCGGGAAAT TTGTCCGGGA TGCGAATGGA GAGGTGCTCG ATGCACTCGG AGAAAGGCTG
CTCGCGACCG AGAAGATTAC CCACCGGTAC GGCCACTGCT GGCGCTGCAA GACACCGATC
ATCTTCCGGG CAACATCCCA GTGGTTCCTG AAAGCCTCGG AGATGCGGGA CCTCATGCTC
TCGGAGGTAA AGAAAGTCAC ATGGTACCCC GAGTGGGCCG GCAGCGCCCG GTTCTATGAC
TGGATCAAGG AGGCCCGGGA CTGGTGCGTC TCCCGGCAGC GGTACTGGGG CATCCCTATA
CCGGTATGGA TCTGCGACAA ATGCGACAAA TACCGGGTGA TCGGCACGAT CGCGGAACTG
GAAAAGGCGA GCGGGCAGAA GGTTCCCGAT CCCCACCGCC CGTTCGTGGA CCAAGTGACA
ATTCCCTGCG AGTGCGGCGG CACGATGAAG CGGGTCGGGG ATATCTTCGA CGTCTGGTTC
GACTCCGCGG TTGCGTCATG GGCAACGGTC GGCTTCCCGG CAAAGACCGA TGAGTTTGAA
AAACTCTGGC CTGCGGACTT TATCACCGAG GGACAGGACC AGACCCGGGG CTGGTTCTAC
TCGCAGCTCG GGGCAAGCAC GATCGCATTC GGGAAGGCGC CGTACAAGAG TGTCTGCATG
CACGGCTTTG CTCTCGATGC AGAGGGCAGG AAGATGTCAA AGAGCCTCGG GAACGTAGTG
GCACCCGAGG AAGTGATCGC AAAGGTCGGG GTCGACGTGC TCCGGCTCTA TGTGCTCTCT
TCATCTGCCC CCTGGGACGA CTTAAAGTTC AACTGGGACG GTATCGCGAC TGTCAACCGG
ACGATGAACA TCCTCTGGAA CGTGTACCGG TTTCCGATGC CGTACATGAT CCTCGACAGG
TTCGAACCCG AGGCAAAAAG CGGGCACTGG GACGGCTCGT TTGTCCGGTC GCACATCCGC
GAGCTTCCGG ACGAAGACCG CTGGATCGTC TCAAGGATCA ACACAGTCGC CGGGATCGTA
GATGCAAGCA CAAAGGAGTG CCAGCTCCAC CGGGCAACCC GGGAGATCCT CAATTTCATT
CTCGAAGATC TCTCGCGCTG GTACGTCCAG CTCGTCCGGC CCCGGATGTG GCTCGAAGGT
GAATCAGAAC AGAAGATCTT TGCCTACGAG ACGATCTATT ACGTGATGCG CCGTCTTGTC
GACCTCATGG CCCCGTTTGC CCCGCACATC ACCGAAGAGA TCTACAGCAA CCTACGGTGT
AAAAACGATC CCGGGAGCGT TCATATGCTC GATTGGCAGG CATGCGACGA TGCGCTCACA
AACCGCGAGC TTGAACACGC TATGGAGCTC GTCCGCTCGT TCGATGACGC AGTCCAGAAC
GCCCGCCAGG CCGGAAAGAG GAAACTCCGC TGGCCGGTGG ACGAAGTTGT GATCGTGACC
GCAAAACCCG AGGTAAAAGA CGCGGTTGCC CGGCTTAATG AGGTCTGCAT GGACCGGGCC
AACGCCCGCA AGGTCACGGT TGTGATAGGC CGGTGGGACC GGATCGGCTG GCATGCAGAG
CCGGTCATGA AAGCGCTCGG CAAGGGATTC GGGAAAAACT CGTTTGCGGT CAAAGGCCTT
ATCGAAGCCG CGGACGGAAA CGCAATCAAG GCTGCGGTCG ATGCCGGGCA AAAATTCCAG
TTAAAAATTG AAGAGGGAAA AATTTCGAAA CCCGACGATC TTAAGATCGG GACAGATTAC
GAACAAGATG TCGTTGAAAT TGGTATAGAG CACGTGAGAT TCACGGAAAA ACTCCCGACG
GATATCTTCT CGGCCCCGAT GGAGGACGGG ACGGTGTACG TGGATGTAGC CCTTACCCCG
GACCTTGAGG CGGAAGGCTA TGCCCGGGAG ATCATCCGGC GGATCCAGGA GATGCGCCGG
CAGCTCGATC TCGCAGTCGA GGACTTTATC ATGGTGGACG TAGCTGTCGC AGACAAACGT
ATCTGCGAGC TTGTGGGAGC GAGCTGGAAG CCGGGTATCG CCGATGAGGT CCGGGCAAAA
ACGCTCTCGC TTCACCATTC AGCAGAGCCG GCAGGATCGT CACACCAGCT CGCAAAGGAC
TGGGATGTCG AAGGGATCGC GATGACGATT GGGATCTCAA AAGTGGCCTG A
 
Protein sequence
MKEVTANFSA KDIEREVQEY WRTHDTYKAV KEQHSAGRAF FFVDGPPYTT GQIHLGTAWN 
KIIKDSILRY HRMNGRNVID RAGYDMHGLP IEVKVEQKLG FASKKDIETF GIEKFINECR
EFAIKNKELM DAQFENLGIW MDFKNAYQTI KPWYVEAAWW TLAKAQEKGM LERGYRVVNW
CPRCETAIAD AEVEYWDETD PSVFVKFPIR GKVSESLVIW TTTPWTLPAN VAVAVGKEFV
YARVHAEKNG REEYLWVAED LVKSVLKKGR YQKFETLETK KGAELIGWEY DSPLMDVVPI
QKEIAHRVVA ADFVAMENTG MVHIAPGHGW DDYVLGTKEK LAIVCPVDGA GKFRPETGIF
AGKFVRDANG EVLDALGERL LATEKITHRY GHCWRCKTPI IFRATSQWFL KASEMRDLML
SEVKKVTWYP EWAGSARFYD WIKEARDWCV SRQRYWGIPI PVWICDKCDK YRVIGTIAEL
EKASGQKVPD PHRPFVDQVT IPCECGGTMK RVGDIFDVWF DSAVASWATV GFPAKTDEFE
KLWPADFITE GQDQTRGWFY SQLGASTIAF GKAPYKSVCM HGFALDAEGR KMSKSLGNVV
APEEVIAKVG VDVLRLYVLS SSAPWDDLKF NWDGIATVNR TMNILWNVYR FPMPYMILDR
FEPEAKSGHW DGSFVRSHIR ELPDEDRWIV SRINTVAGIV DASTKECQLH RATREILNFI
LEDLSRWYVQ LVRPRMWLEG ESEQKIFAYE TIYYVMRRLV DLMAPFAPHI TEEIYSNLRC
KNDPGSVHML DWQACDDALT NRELEHAMEL VRSFDDAVQN ARQAGKRKLR WPVDEVVIVT
AKPEVKDAVA RLNEVCMDRA NARKVTVVIG RWDRIGWHAE PVMKALGKGF GKNSFAVKGL
IEAADGNAIK AAVDAGQKFQ LKIEEGKISK PDDLKIGTDY EQDVVEIGIE HVRFTEKLPT
DIFSAPMEDG TVYVDVALTP DLEAEGYARE IIRRIQEMRR QLDLAVEDFI MVDVAVADKR
ICELVGASWK PGIADEVRAK TLSLHHSAEP AGSSHQLAKD WDVEGIAMTI GISKVA