| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2267 |
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| Symbol | |
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| ID | 5410999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2334430 |
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| End bp | 2336160 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869519 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001405424 |
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| Protein GI | 154151806 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0262742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.128517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA CTATTTCTCT TCTCTGTATC GATGACGAAC CCCTGTTTCT GGACGCGTTC
AAGGCACGGC TCGAGCAGGA AAAGGATCTG TTAGTCACGA CCTCGATCTC TGCTTCCGAT
GCACTGGATC TGCTCAATCG ACAGTACTTT GATGTAATTA TTGCAGATTT CTCCATGCCC
GACATGGACG GAATTGCCCT CTTAAAGGAG ATCCGGGCAC GGGGGGGCCA GTCGATCTTT
GTAATGGCCA CGGCAAAGAG GCTCGCACAT ATCGCCCGCG ATGCCCTCAA CACCGGCGCC
GATTACTATC TCCAGAAGGG CGCCGATATG GCAGGTGAGG TCGAACGGCT GATCGATTTT
ATCCGGGTCA GGGTCCCGCA GAAGAACGCC GAATATGAGC TGATGGCCTG GGCCAGGTTC
TACAACTCGA TTGTGGATAG CGGACCGGAG CTCATCTCCC GGGTCAAGCC TGACGGTTTA
TTCAGCTACG TAAATGAACC CTGTGTCCAC CTGTTCAAAA AGCCCTACCG CCAGTTGGTA
AAGGAGAATT TCTTTGCCTT TATACCCGAC AGCGAGCGTG CCGAGATCTT CTCCCGCATC
CAGGGCCTCT CCTTTGACAA GCCGGACTGC CTGCTCCAGC ACCACATCAT TGCCGGGGAC
GGAAGAAGTG TCCTTCTTGA ATGGAGTTAC CATGGGTTCT TTACCCAGGC CGGGACGATC
CAGGAATACC AGATAACGGG AAGGGATACC TCCCACCTGG TACGGATCGG GGGAAGTTCC
CCAGCTGAAA CTACGGTCTA TCCGGTTGCG CCAAGCAGCC AGCCGGCAGC GGAATTGCCA
CCGGAACATC CCGATGACTG GGGAGATATG ATGGCTACCC TCCAGTCACT CGATGCCCCG
GTTTTTGCGG TGGATACCCG GGGAATGATC ATTGCCTGGA GTGCAAAACT TGCCCAGCTC
ACCGGGGTCC CCGCGGTGGA GATGATCGGG AAGGCCGGCC AGGAGTACGC CGTACCTTTC
TATGGCAAAC CCGGCCCCAT GCTGATCGAT CACATCATCC GGCCTTTGGG ATCAACCCCT
GGCGGAAATA TTCCTGCAGC AAAGAGGGTT GGGGACACGT ACATCGGAGA GAAAGAACGC
GTCTCCATCC GGGGCCGGCC AATGATCCTG CAGGGAAAAT GCTCCCCGGT TCAGGATGCC
GCCGGACAGC TCATTGCTGC CATCGAAGCG ATTACGGTGA CCGGAATAAA CGAGATGACA
GGCAATACAA AAGCCGAAGA GTACCTCGGC GGGATCTCCA GCCTGACCCT CAAAATCGTT
GGCGATGGGG TAGGCAGATC TCTTGCAGGT GCAATCGGCT CATCAACCGG GGGGTACGGT
ATTTATGCCA CCACCCGCAG GATCTTTGTC ATCCGTAATC CCGATCTTGA TGTCACCGCC
CCGCAGGCAG GAGTCCAGTT CGGCACATTC CTCATGGACG AGCTCTTCGG GACCTCATCG
GATACAAACC AGAAAGCCAT CGGTGAACTG GAAAACCTCA GCGTCTTCTC CGCGGAAAGG
GGAGAACTGG CCCGTGCAGT CCTCAAAAAA CCTGTACTCC TCTCGGGATA CCTCGACCTC
AAAAAAACCG ACGGGACCAG TTTCCGGTTA TACATCGACC ACAAGAGGTC CTATACCTAT
ATCGAGAACC TGCTCAAGAT GTTCTGTCCC GATATCCTGG GTTTTGAGTA A
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| Protein sequence | MPQTISLLCI DDEPLFLDAF KARLEQEKDL LVTTSISASD ALDLLNRQYF DVIIADFSMP
DMDGIALLKE IRARGGQSIF VMATAKRLAH IARDALNTGA DYYLQKGADM AGEVERLIDF
IRVRVPQKNA EYELMAWARF YNSIVDSGPE LISRVKPDGL FSYVNEPCVH LFKKPYRQLV
KENFFAFIPD SERAEIFSRI QGLSFDKPDC LLQHHIIAGD GRSVLLEWSY HGFFTQAGTI
QEYQITGRDT SHLVRIGGSS PAETTVYPVA PSSQPAAELP PEHPDDWGDM MATLQSLDAP
VFAVDTRGMI IAWSAKLAQL TGVPAVEMIG KAGQEYAVPF YGKPGPMLID HIIRPLGSTP
GGNIPAAKRV GDTYIGEKER VSIRGRPMIL QGKCSPVQDA AGQLIAAIEA ITVTGINEMT
GNTKAEEYLG GISSLTLKIV GDGVGRSLAG AIGSSTGGYG IYATTRRIFV IRNPDLDVTA
PQAGVQFGTF LMDELFGTSS DTNQKAIGEL ENLSVFSAER GELARAVLKK PVLLSGYLDL
KKTDGTSFRL YIDHKRSYTY IENLLKMFCP DILGFE
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