| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2257 |
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| Symbol | |
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| ID | 5411074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2325408 |
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| End bp | 2327177 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869509 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001405414 |
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| Protein GI | 154151796 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0355972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGA CCCAGGTACC AGATACCCTC ACAGGGGCCG CGAAAAAGGG GATCGATTAC
AAGTGGATCG TCCTCTCGAT CACCACCATC GAGATGTTCA TGGTCTCGGT GAACGGGAGT
ATTACTCTCA TCTCGCTTCC TGCGATCTTC AACGGGATTA ATATCGATCC GCTCACCTCA
TTCCAGTACC TCATATGGGT GCTGATGGGT TACAGCCTGG TTACCGCAAC CCTCCTTCTT
TCCTGCGGCC GGCTCTCGGA TATGTACGGG AGGGTAAAAC TTTACAATAT CGGTTTTGCG
ATCTTCACAC TGGGCTCCAT CCTGCTCTTT CTCACGCCGG ACAAAGGCAA TGCCGGAGCC
ATTGAGATCA TCGCCTTCCG TCTCGTTCAG GCTGTAGGGG CCTCGTTTAC CTTCTCCAAC
AGCGCCGCGA TCCTCACCGA TGCGTTTCCC CCGGACGAGC GGGGCAAAGC GCTGGGGCTC
AATACCATAT CCTTTCTTTC GGGGCAGTTT GTGGGACTGA TTCTTGGTGG CGTCCTCGCG
TTCTATAACT GGCGGTACGT GTTTCTCGTC AGCGTGCCGG TTGGCATCCT TGGCACGGTC
TGGGCATACC TCAAACTTAA AGAGACCCCG CTTCCAAAAA AAGTGCGGAA GATCGATGTC
TGGGGCAACA TAACGTTTGT CGCCGGCCTC ACAACCCTTT TGATCGGTAT CACCTATGCT
CTTCTTCCCT ACGGGAATGA TCCGATGGGA TGGGGTAACC CGTGGGTTCT TGGAGCGATC
GGCACCGGCA TCCTCCTCCT GATTGCATTT CCCATCATTG AAAGCAGGGT CGAGGATCCG
ATGTTCCGCC TCGATCTCTT TAAGATCCGG GTCTTCACGC TGGCCAACAC TGCCGGTTTT
TTAAGCGCCC TGGCGCGGGG TGGCATGTTT TTTATCCTGA TCCTGCTGCT GCAGGGCATC
TGGCTTCCGC TCCACGGCTA CAGCTACGAG TCTACACCCT TCTGGGCCGG GATCTTCATG
TTGCCGCTCA CCGCCGGGTT TGTGATTATG GGCCCGCTCT CCGGCTGGCT CTCGGACAAG
TACGGCGCCC GCTGGTTTGC CACCGGAGGC CTGATCCTGA TCGCCCTCTC GTTTGTAATC
CTCGCCTCAC TGCCCTATAA CTTCGATTAC CCTATCTTTG CTGTTGCGCT CCTAGTCATG
GGGATAGGAA ACGGTATGTT CGGGTCGCCC AACATCGCGT CCATTATGAA CTCCGTGCCT
CCCGAGGACA GGGGCGTGGC CTCGGGCATG CGGTCGATGC TCCAGAACAG CGGCATGGTC
GTCTCGATGG CGCTCTTCTT TACCATCGTG ATCGTGAGCT TAACACACCT CTTTCCCCCG
GAACTGGCCT CGTCGCTCGT GAGCACCGGG GCGCCGGAGC TTATCGTCCC CATGGGCGCC
ATCCCGCCGA CCGGTGCCCT CTTTGCCGCA TTTCTGGGCT ACAACCCGGT CCACACAATC
CTCGTGGCCA TGCCGGCGGC AACCGTTGCC GCGATCAGCC CTGCAACGAT CGCGGTCCTG
ACCGGTACTA CCTGGTTCCC GACAACGCTC GCAAATGCCT TCATGCCCTC GCTTCGGCTC
TCGTTCTATA TCGGGGCCCT CCTCTCGATT ATCGCGGCGG TTCTTGCCTC TATGACTGGA
TCCCGTTTCG TCCACGAAGA ACAGGCAGGA CGCGGGAAAA CAGATGAAGT GCCGGAGACT
GTTGAGGACG TACCCGTGGA TATTACCTGA
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| Protein sequence | METTQVPDTL TGAAKKGIDY KWIVLSITTI EMFMVSVNGS ITLISLPAIF NGINIDPLTS
FQYLIWVLMG YSLVTATLLL SCGRLSDMYG RVKLYNIGFA IFTLGSILLF LTPDKGNAGA
IEIIAFRLVQ AVGASFTFSN SAAILTDAFP PDERGKALGL NTISFLSGQF VGLILGGVLA
FYNWRYVFLV SVPVGILGTV WAYLKLKETP LPKKVRKIDV WGNITFVAGL TTLLIGITYA
LLPYGNDPMG WGNPWVLGAI GTGILLLIAF PIIESRVEDP MFRLDLFKIR VFTLANTAGF
LSALARGGMF FILILLLQGI WLPLHGYSYE STPFWAGIFM LPLTAGFVIM GPLSGWLSDK
YGARWFATGG LILIALSFVI LASLPYNFDY PIFAVALLVM GIGNGMFGSP NIASIMNSVP
PEDRGVASGM RSMLQNSGMV VSMALFFTIV IVSLTHLFPP ELASSLVSTG APELIVPMGA
IPPTGALFAA FLGYNPVHTI LVAMPAATVA AISPATIAVL TGTTWFPTTL ANAFMPSLRL
SFYIGALLSI IAAVLASMTG SRFVHEEQAG RGKTDEVPET VEDVPVDIT
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