| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2248 |
|---|
| Symbol | |
|---|
| ID | 5409936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2317487 |
|---|
| End bp | 2318485 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640869500 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001405405 |
|---|
| Protein GI | 154151787 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2100] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000187282 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0755271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATG TCCGCATCAC CGCCGGCTCG GATATCCCAC TTGTCGGCTC GCTCTATTTT
GGTGTTATTG ACCGGGGCAC GAGCCTCCTG CAGGTGCGCC CGAGCTGCGG CTGTAACCTC
AATTGTCCCT TCTGCTCGGT GGATGCCGGG CCATGCTCGA AAACCCGGGC AACCAGTTAC
GAAGTCGAAC TGGATTACCT CCTCTCGGCC GTTGAGGAGA TTGCCCCCTT CAAGGGTACG
GGAGTCGAGT GCCACATCGA TTCCCCGGGC GAACCGCTCA TGTACGCCCG GCTTCCCGAA
CTGGTTGCCG CACTCAAGGC GATCGATGCC GTCTCAACCG TCTCGCTCCA GACCAACGGC
ACGCTCCTTG ATGAGAGAAA AATCGCAGCG CTGGCGGACG CCGGCCTCGA CCGGATGAAC
CTCTCGCTCC ACGCCCTCGA CCCTGCACTC GCCCGCGAGC TCGCCGGGGT GGACTGGTTT
GATATTGAGA AGGTGACGGA AGCCGCCAGG GCGGTGGCGG CGAGCTCTAT GGACCTCCTT
ATAGCCCCAG TGTACATGCC GGGGATCAAC GACGCCGAGA TCCCCAAACT GATCGCTTTT
GCCCGGGAGT GCGGGGCAGG CAAAAGGTTC CCGCCTCTTG GGATTCAGAA GTTCGAGCGG
TACAAGTACG GCCGGACGCC CAAAGGCGTG AAGGTCCAGA GCTGGTGGCA GTTTTTTAAC
CGGAGTATCA AAGAGTGGGA GAAAACCTCC GGCCTCGCCC TCCGCCTCGA TCCCGAACGG
AATTTCGGGA CGGGACGGCG CCCCTCCCTC CCGCAGGTGT TTAAAAAAGG CGAGAAGGCA
ACCGTTGAGA TCAAAGCACC CGGCTGGATC CACGGCGAGC AGCTGGGAAT TGCAAGAAAC
CGCGTGGTCT CGGTCTTTGG CTGCGATAAA ACCTCGGGGC AGGTCCGGGT AAAGATCGTG
GCCGCCAAGA ACAATATCTA CGTGGGCGTG CCGGTTTAA
|
|---|
| Protein sequence | MPHVRITAGS DIPLVGSLYF GVIDRGTSLL QVRPSCGCNL NCPFCSVDAG PCSKTRATSY
EVELDYLLSA VEEIAPFKGT GVECHIDSPG EPLMYARLPE LVAALKAIDA VSTVSLQTNG
TLLDERKIAA LADAGLDRMN LSLHALDPAL ARELAGVDWF DIEKVTEAAR AVAASSMDLL
IAPVYMPGIN DAEIPKLIAF ARECGAGKRF PPLGIQKFER YKYGRTPKGV KVQSWWQFFN
RSIKEWEKTS GLALRLDPER NFGTGRRPSL PQVFKKGEKA TVEIKAPGWI HGEQLGIARN
RVVSVFGCDK TSGQVRVKIV AAKNNIYVGV PV
|
|---|
| |