| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2246 |
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| Symbol | |
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| ID | 5409934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2314746 |
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| End bp | 2316968 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640869498 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001405403 |
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| Protein GI | 154151785 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.106897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.610423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAA AGGGCAAAAT TCTGGTTCGC GGCATCGTCC AGGGTGTCGG ATTCCGCCCT
TTTGTATATG CCCGGGCATC TGAGTTCGGG ATCGCAGGCT CGGTCAAGAA CCTCGGGAGC
GAGGTGGAGA TCTATGCCCG GGGCGAACGG TTTTTAGAGT TTCTTGCAGC AGTCTCCCGT
GGCCCGCCGA TGTCCCGGAT CGATTCGGTT GACGTGACCG ATACCGATGC CAGGATCCCG
GACGGGTTTG TCATCAGAAG CAGCGGGACC GGCACTTTTT CCGGGATGAT TCCTCCGGAC
ATCGCGATCT GCAGCGACTG TATCGCGGAT ATTTTTACAC CCGGTGGAAG GTACGAGGGA
TACTGGGCCA CCTCTTGTGT AAACTGTGGA CCACGGTACA GCATCATCCG GGCGATTCCC
TATGACCGGG AGAGGACAAG CATGGACGAT TTCCCGAAGT GCCCGGCCTG TGCAGGAGAG
TACGGTGACC CGCACTCCCG GCGTCACCAT GCCCAGACGA TCGCCTGCCA TAGGTGCGGC
CCCTCGCTCC GGCTCATGGA CGGGGCTGGC GCCGATCTTC CCTGCACCGA TCCGGTCCGG
GAGGCGGCCG CGCTGCTCGA TGCCGGGAAG ATCCTCGCGA TCCGGGGCGT TGGGGGCTTC
CACCTTGCCT GTATAGGGGA ATCCTCAGGA GAACTCAAGG CCCGCCTCGG CCGGCTCGAA
CAGCCGTTTG CGGTGATGGT CCGGCCGGGC TATGCCGAAA CAATAGCCTG CGTCTCCCCG
GCCGAGCGCG AACTGCTCGA GAGCCCCGTC CACCCGATCG TGGTGCTTGA AAAATGCGTT
CATTCCTCTC ACGCAGGCAT CAGTAACCTG CACACCATCG GCTGCATGCT CCCCTACACC
GGGCTCCACC ACCTCCTCTT CTCCCACCTG CAGCACCCGC TCCTAATCAT GACAAGCGCC
AATATGCCCG GCTACCCGAT GATCACGGAC ACGGATGTCG CGCTTGCAAA ACTCGCAAAG
GACGCCGATT ATTTCCTTGT CCACAACCGC ACCATCGAAA ACCGGGTTGA CGACTCGGTG
ATGCGTGACG GTCTGATCCT CCGCCTCTCC CGGGGGATCG CCCCGAAACG GACGGCCATC
AGTCTCGGTT CCCGCTGCAT TCTCGGCGTT GGGCCCGAGC TGAACGCGAA CGCCACGATC
TACAAGGGGG GGTTTGCCGT TACCTCCCCC CACGTGGGCA ATGTCCGGAA CCCGGCAACG
CTCGCGTACC TGCAGGAGAC TGTGGCAAAA CTCGAGCGGT TACTGGGAGC AGAGTACGAT
GTAGTAGCCC ACGATCTCCA CCCGCAGTTC CTCTCTACCC GGTTTGCAAA GGAGATCGCC
GAAGAGCGGG GGATTGGGCT TGTTCCAGTC CAGCACCACC GGGCCCATAT CGCCGCGACA
ACAACGGAGC CCTGTATCGG GATCGCGATT GACGGCGTTG GCTATGGGGA CGATGGCACG
ATCTGGGGTG GCGAGGTCTT TGCCGGACAG GTGCCGGATC TCGCCCGGGT CGCCCACCTC
GAACCGGTGG CGATGCCGGG TGGCGATCTT GCCACCCGGT TCCCGGAGCG GATGCTGTAC
GGCATCCTGC CCGAAGAGGC CTGCCTCGAT CTTCTCCGCA GCCGGGGCTG GACAGATGTA
GAGATAGGAG TGATGCGAAA GCAGGTGGCA GGCGGCTTCA ATGTCACAAT GACCAGCAGC
ACCGGCCGGG TCCTCGATGC GGCGGCGGCT TTGCTTGGGA TCTGCCGGGA GCGTACGTAT
GACGGGGAAC CGGCCATGAA ACTCGAATCG GCGGCAGCTG GCGGGAAGGC AGAAACATGG
GAGCCGGTAT TTTCCCGGAT CGGCGGGTGT GAGTGCCTCT CTACCCGTGC GATTCTCAAA
GAGGCCCTTA CCCGGATCTC CTGCGCACAC AACCTTGACC AGGGAGTGAT CCGGGACATT
GCGGCATCCC TCCAGTACAA CCTTGCCCGG GGGATCGCAG CGCTCGCCAT CCACGCCGCA
GAAAGAGAGG GCATTTCCCG GGTTGCCCTG AGCGGGGGCG TGGTTGCCAA CAGGGCCATT
CGGGAGACCA TCCGTGCGGA GATCGAAAGC AACGGTCTTG CGCTTCTTAT TAACTATGCC
TACCCGCCCG GTGACGGATG TGTCTCTTTT GGCCAGTGCG TCTGGGCAGG GAAACTCTCA
TAG
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| Protein sequence | MQTKGKILVR GIVQGVGFRP FVYARASEFG IAGSVKNLGS EVEIYARGER FLEFLAAVSR
GPPMSRIDSV DVTDTDARIP DGFVIRSSGT GTFSGMIPPD IAICSDCIAD IFTPGGRYEG
YWATSCVNCG PRYSIIRAIP YDRERTSMDD FPKCPACAGE YGDPHSRRHH AQTIACHRCG
PSLRLMDGAG ADLPCTDPVR EAAALLDAGK ILAIRGVGGF HLACIGESSG ELKARLGRLE
QPFAVMVRPG YAETIACVSP AERELLESPV HPIVVLEKCV HSSHAGISNL HTIGCMLPYT
GLHHLLFSHL QHPLLIMTSA NMPGYPMITD TDVALAKLAK DADYFLVHNR TIENRVDDSV
MRDGLILRLS RGIAPKRTAI SLGSRCILGV GPELNANATI YKGGFAVTSP HVGNVRNPAT
LAYLQETVAK LERLLGAEYD VVAHDLHPQF LSTRFAKEIA EERGIGLVPV QHHRAHIAAT
TTEPCIGIAI DGVGYGDDGT IWGGEVFAGQ VPDLARVAHL EPVAMPGGDL ATRFPERMLY
GILPEEACLD LLRSRGWTDV EIGVMRKQVA GGFNVTMTSS TGRVLDAAAA LLGICRERTY
DGEPAMKLES AAAGGKAETW EPVFSRIGGC ECLSTRAILK EALTRISCAH NLDQGVIRDI
AASLQYNLAR GIAALAIHAA EREGISRVAL SGGVVANRAI RETIRAEIES NGLALLINYA
YPPGDGCVSF GQCVWAGKLS
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