Gene Mboo_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2238 
Symbol 
ID5410366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2306535 
End bp2307140 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID640869490 
Product30S ribosomal protein S3Ae 
Protein accessionYP_001405395 
Protein GI154151777 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AAAAACAGGC TGGAAGAAGA GTTGAAGGCT GGAAAGCCAA GAGCTGGTTC 
AAGGTGTACA CCCCCGACAA CCTCGGCAAG GCGTACATCG GCGACACCAT CGCAAGCGAA
GTTGAGACCG TCAAGGGCCG TATCATGCAG GCCACGCTTG GCGAGATCAC CAACGACTAC
GCAAAGCAGC ATATCAAGAT GAGCTTCAAG ATCGCAGAGG TCACCGGTGA TGCGGCCTAC
ACCGAGTTCG TCGGCCACGA AGTGACCAGG GACTACCTCA GGTCGCTTGT CAAGCGCCGC
AGCTCCCGTA TTGACTGCCA CGTGCAGGTC GTTACCAAGG ACAACAAGAA GGTCAGGCTC
ACGATCAGCT GTTATACCTT CGCACGGGCA AACATTGCCC AGGAGCACGC ACTCCGGAAC
GCGATCACGG CCGGCCTTGT TGCACAGGCA CAGGCATGGG ACCTTAATAC CCTCGTCAAC
GGCGTTGTCT CGGGCGAGAT CTCCAAGGAT CTCTTCAAGC TCGTAAAGAC CCTCTACCCC
ACCCGACGGG TCGAGATCAT CAAATCCAAG GTCGAGCAGG TCGCAGCACC GGTCTCCACC
GCATAA
 
Protein sequence
MAKKKQAGRR VEGWKAKSWF KVYTPDNLGK AYIGDTIASE VETVKGRIMQ ATLGEITNDY 
AKQHIKMSFK IAEVTGDAAY TEFVGHEVTR DYLRSLVKRR SSRIDCHVQV VTKDNKKVRL
TISCYTFARA NIAQEHALRN AITAGLVAQA QAWDLNTLVN GVVSGEISKD LFKLVKTLYP
TRRVEIIKSK VEQVAAPVST A