Gene Mboo_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2230 
Symbol 
ID5410358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2300799 
End bp2301548 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content59% 
IMG OID640869482 
Productsignal transduction protein 
Protein accessionYP_001405387 
Protein GI154151769 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG CACGGGATTT CATGCTTGAG ATTCCGGTGC TTGCTTTTTG TGACGGGATT 
ACCAAGGCAC GGCAGATCTT GAGAGACGAC CGGTTCCGGG AGGTCTACGT GACCGGCCAG
AAGAAAGACC TGCTCGGGTA CATCGATATC ACCGATGCCC TGCGGGTCAC CGCAACCAAA
TCGAACGTGA CCGTCGAGGG ATTTGTCAAG GAGGCGGCAA GCGCTGCCCC CGATGCCTCT
GTCGAGAGTG CTGCCAAAGC CATGCGGGCC CATGCCACCG ACAGCGCGGC GATCGTGGAT
GCCAGCCGCC ATATCCTGGG CGGGGTGCTC CTCTCCGATC TCTTCCCGGT CATCATATCG
AGAAACGAAC TCTCCGGCAG GGTAAGTTCG CGCATGTCAA AGAAGATCCA GACTGTGGAC
CCGGCCGACA CTCTCCAGCA GGTATATGCG AAGATCACCG AGTGCGGGTT TACCGCATTC
CCGGTGGTTA AGAAGCGTCG GCTGGTGGGG TTGATTTCCC GGAGGGACCT GATCCGGTCG
GGAGGAGTGC GATCGGCCAT CGCCCAGAAC AGCACCCGTA CGGTTGGAGA TGTGATGATC
CCGGATGTGA TTACGGTTCC GTCAGGATCA TTGCTCTCCG AAGCCGCCCG GCTCATGGTG
GATAACGACA TAAGCCGGCT CCCGGTCGTG GATAACGAGT CCGTGGTGGG GATTATCGAC
CGCCATGATG TCCTTGCCGG GCTCGCATAA
 
Protein sequence
MKTARDFMLE IPVLAFCDGI TKARQILRDD RFREVYVTGQ KKDLLGYIDI TDALRVTATK 
SNVTVEGFVK EAASAAPDAS VESAAKAMRA HATDSAAIVD ASRHILGGVL LSDLFPVIIS
RNELSGRVSS RMSKKIQTVD PADTLQQVYA KITECGFTAF PVVKKRRLVG LISRRDLIRS
GGVRSAIAQN STRTVGDVMI PDVITVPSGS LLSEAARLMV DNDISRLPVV DNESVVGIID
RHDVLAGLA