Gene Mboo_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2221 
Symbol 
ID5410156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2293850 
End bp2294215 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content54% 
IMG OID640869472 
Product50S ribosomal protein L18e 
Protein accessionYP_001405378 
Protein GI154151760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAA CCGTGGAAAA GACGAACCCC CGTCTTACCA ACCTTATTCT GCTCTTAAAG 
AACACATCCA GGGAGAATGA GGCAAAGATC TGGCGTGAAA TTGCCGGAAG ACTGGAGACC
CCCAACCGGA ACTATGCGGA GGTCAACCTG TCCAAGATCA ACCGCTATGC CCAGAAAGGC
GAGACTATCA TCGTCCCGGG CAAAGTGCTG GGCAGCGGTG TACTGGATCA GTCCGTCAGG
ATTGCCGCGC TGAACTTCTC GGAATCGGCC ACAAGCAAGA TCCGGGATGC GAAAGGGCAG
TGCATGACCA TCGAACAGCT GTTAAAGGAC AACCCCAAGG GTAGCGGTGT CCGGATCCTG
AGGTGA
 
Protein sequence
MTRTVEKTNP RLTNLILLLK NTSRENEAKI WREIAGRLET PNRNYAEVNL SKINRYAQKG 
ETIIVPGKVL GSGVLDQSVR IAALNFSESA TSKIRDAKGQ CMTIEQLLKD NPKGSGVRIL
R