| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2211 |
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| Symbol | |
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| ID | 5411231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2287112 |
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| End bp | 2288191 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640869461 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_001405368 |
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| Protein GI | 154151750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATA ATAAGAAACG GTTCACATCG TCGCGCAAGC TCGACCACCT GCGCATCTGC
GCAGAAGAGG AGGTCGAATC GGGCGATGCT GGTTTTGGCG ATGTCAGGCT CGTTCACCAT
GCGCTGCCGG AATGCGACAT GCGTTCCATC GATCTGTCTA CCCGGTTTCT GGGCCACACC
CTCTCCTCTC CGCTCTTTGT CTCGGCCATG ACCGGTGGCC ATCCCGGGAC AAAAGATGCA
AATGCGCGAC TTGCCCGGAT TGCCGAGCGC TTCGGCCTTG GCATGGGCGT GGGCTCCCAG
CGGGCGGCTC TCGAAAATCC CGCCCTTGCA GATACCTTCT CGGTGGTCCG CGATGAGGCT
CCCCATGCGT TTCTCGTGGC AAACCTTGGC GCTGTGCAGC TCCGCGAGCA CGGGGCGGCA
TGGGCCGGGC AGGCCATTGA GATGATCGGC GCAAACGCGA TCGCGATCCA TCTCAACTTC
CTCCAGGAGG CTATCCAGCC GGAGGGCGAT CTCAGCGCAA CCGGCTGCAT AGCCGCGATT
GCCGACCTCT GTGCGGAGAC GAAGATCCCG GTGATTGTAA AAGAGACCGG GTGCGGGATC
TCGCGGGAGG TCGCCCGATT GTGCTGGAGC GCGGGGGCGG CGGCGATCGA TATCGGCGGC
TGGGGCGGGA CATCCTGGGC GGCAGTTGAG AGCTTCCGGG CGGACCGGAA GGATGCACAG
GGCCGGGCCC TCAAAACCCT GGGCGAGGAT TTTGCCGGCT GGGGCATTCC CACGGTGGTA
AGCCTTGCCG AGGTGGCAGG AACCGGCAGC CCGGTGATCG CGTCGGGGGG TATCCGGAGT
GGCATCGACA TGGCAAAGTG CCTGGCCCTC GGGGCAGATC TCTGCGGTAT GGCACTCCCG
CTCTTAAAAC CGGCACTGGA AAGTGACGAA GCACTTGCCG CGAGAGTCGA AACGATACAT
CGCGAACTGG TGGCCTCGAT GTTCCTGTGC GGCGCCGCAC GGATCCGGGA CATGCGCCGG
GCACGGCTCT TTATTACGGG CAGGACACGG CAGATGATGG ATGATGGTAA TCCTGCGTAA
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| Protein sequence | MAYNKKRFTS SRKLDHLRIC AEEEVESGDA GFGDVRLVHH ALPECDMRSI DLSTRFLGHT
LSSPLFVSAM TGGHPGTKDA NARLARIAER FGLGMGVGSQ RAALENPALA DTFSVVRDEA
PHAFLVANLG AVQLREHGAA WAGQAIEMIG ANAIAIHLNF LQEAIQPEGD LSATGCIAAI
ADLCAETKIP VIVKETGCGI SREVARLCWS AGAAAIDIGG WGGTSWAAVE SFRADRKDAQ
GRALKTLGED FAGWGIPTVV SLAEVAGTGS PVIASGGIRS GIDMAKCLAL GADLCGMALP
LLKPALESDE ALAARVETIH RELVASMFLC GAARIRDMRR ARLFITGRTR QMMDDGNPA
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