Gene Mboo_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2204 
Symbol 
ID5411224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2278354 
End bp2278842 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID640869454 
Producthypothetical protein 
Protein accessionYP_001405361 
Protein GI154151743 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CAAACCCGGG CCTTCCCCCC ATCGTCGGCA GGGATCCGGA AATCCTTATC 
CTCGGCAGCT TTCCCAGCCT CATATCGCTT GGAAAAAGCG AGTACTACGG TAATCCCAAA
AACCAGTTCT GGAGGATCAT AGAGATCCTT TTCGGGATCG ACCACGCCCT TTCCTATCCC
CTCCGTACAC ATCTCCTGAC AGAGCACCGG ATCGCCCTCT GGGATGCCCT TGCTTTCTGC
AGGCGGGAAG GAAGCATGGA TTCCGCAATC TGCGATCCGG TTGCAAACGA CATAACGGGG
TTTGTTGCAG CTCACCCGAC AATACGATGC ATTGCACTCA ACGGGAGCAC TGCCGGCCGT
TATTTTAAGA GCATGAACCC GGACCTGAAC GGCCATATTC TTCCTTCAAC CAGTCCCGCA
TATGCCAGCA TGTCTTTTGC GGAAAAGACT CTAGAATGGG CGCGCATCTG CATCCGGGAT
GCTCTATAA
 
Protein sequence
MKNTNPGLPP IVGRDPEILI LGSFPSLISL GKSEYYGNPK NQFWRIIEIL FGIDHALSYP 
LRTHLLTEHR IALWDALAFC RREGSMDSAI CDPVANDITG FVAAHPTIRC IALNGSTAGR
YFKSMNPDLN GHILPSTSPA YASMSFAEKT LEWARICIRD AL