Gene Mboo_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2189 
Symbol 
ID5410975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2266668 
End bp2267480 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content57% 
IMG OID640869439 
Productdihydropteroate synthase 
Protein accessionYP_001405346 
Protein GI154151728 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.292691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAT GCCGGGTCAA CAAACTCGAT ATTGGTGGGG ATGCCCCGCC CCGCATTATG 
GGAGTCATCA ACTGCAGCGG TGAATCATTC TACCAGGCAT CGTACATCCC CATCGACAAG
GTCCACGAAA CTGCGGTAGC CATGGTCGAG CAGGGTGCGG ATATGATCGA TATCGGTGCC
CGGAGCACGG CCCCCAACAC CCAGCCTATC AGCGGGAGGG AAGAGGCAGA ACGGGTTGAC
GCAGCCCTTA AGGAACTGGA CGGGAGCGGG ATCACTCTGT CTGTGGATAC GATGCACCCG
GGCGTGCTCG ACATCTGTCT CAAGCACGAG ATCCACGCGG CAAACGATAT CAGCGGTTTT
GTCTCACCGG CATATGCAAA GAAGGTTGCA GATGCCGGCC TGCCGACGTT TGTTATGGCG
GCAAACCAGA ACCCGGGCGA TCCGATCGGA GTAGATGCTA CCCTTGCCTC TCTCGAAGGA
GTGATAAAGC GGTGCGAGGC ATCGGGCGTA AAGGAGTACG TGCTCGATCC GGGTATCGGC
ATCTGGACAC CGCACCGCTC GGTTGCGGAT GACTGGGAAC TCTGCCGGCA GTTCGAGACC
TTCCAGCGTT TTGACCATCC TTTGCTGGCA GCAGTATCAC GCAAGACCTT CATTGGGATG
CTCCTGAATC GCGAACCGGA AGACCGGCTA CCGGGCACCC TTGCAGTCAC CATGACACTG
CTCGAAAAAG GAGCGTCAAT TGTCAGGACC CACGATGTGG CAGCCACACG GGATATAATC
CGGGTGTACG AACAGATGGT GAAGAGGGCA TGA
 
Protein sequence
MKSCRVNKLD IGGDAPPRIM GVINCSGESF YQASYIPIDK VHETAVAMVE QGADMIDIGA 
RSTAPNTQPI SGREEAERVD AALKELDGSG ITLSVDTMHP GVLDICLKHE IHAANDISGF
VSPAYAKKVA DAGLPTFVMA ANQNPGDPIG VDATLASLEG VIKRCEASGV KEYVLDPGIG
IWTPHRSVAD DWELCRQFET FQRFDHPLLA AVSRKTFIGM LLNREPEDRL PGTLAVTMTL
LEKGASIVRT HDVAATRDII RVYEQMVKRA