Gene Mboo_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2176 
Symbol 
ID5412209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2246225 
End bp2246863 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content56% 
IMG OID640869422 
Producthypothetical protein 
Protein accessionYP_001405333 
Protein GI154151715 
COG category[S] Function unknown 
COG ID[COG4066] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC TGCATCAGGA TACGTCACCG GAAGAAAAGG CGTACATTGC ACAGGTCGCC 
CGCGATCTCG CAGCGGCAGG TACAAAACAG GATCTGGGAG TGCACCTTGC CCGCGCAGCC
GGGGAATATA CCCTTGCCGA TCTCCAGGTG ATTGGCGGCA GGCTCTTTGC GGAAGTGGAT
GCCCTGCCCG AACCGTACCG GAGCCGGGTA AGGCCGTATT TCCACGAGCA GATCTTCGGC
GCCCACCACC GGCTCCTCCT GATGTACCGG TCTGGTGTGT TCCGGCAGGA TCAGGATCCA
ATCCGGGACC GCGAAACTTT CGATAAATTC TGTGCGATGA TCCCTGACGG CTGTTTTACC
TGGGACGAAC AGGCAGAGAG AACACCGTTC CGTTATTCTC CCCGTCACCG GCTCTTCTAT
TATCTCATGG CCGCGTTTAC GATGTTTGTC CTTGATCGGC CCGGCCATCC CGTAGGTATG
CCCTTCCCGG GAGGATTTAC CGTAGAGGAG AGAAATGGCA ACTGTTACTG CCTGATCCGG
GACCGCGAGA AAGAGGTGTT TTTTTCCATC TGCAACTTTT GCCCGGCAAA GCAGAACGAG
GGGGAATACC CCAGATATTC AGGGAAAAAC ACGAAATAA
 
Protein sequence
MTTLHQDTSP EEKAYIAQVA RDLAAAGTKQ DLGVHLARAA GEYTLADLQV IGGRLFAEVD 
ALPEPYRSRV RPYFHEQIFG AHHRLLLMYR SGVFRQDQDP IRDRETFDKF CAMIPDGCFT
WDEQAERTPF RYSPRHRLFY YLMAAFTMFV LDRPGHPVGM PFPGGFTVEE RNGNCYCLIR
DREKEVFFSI CNFCPAKQNE GEYPRYSGKN TK