Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2166 |
Symbol | |
ID | 5411277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 2238812 |
End bp | 2239909 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640869412 |
Product | L-tyrosine decarboxylase |
Protein accession | YP_001405323 |
Protein GI | 154151705 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.511307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGTA ACGGGATATC AGAAGACGAT CTCTTCTCTT TTTTATCCTT ACACAAGAAG GAAGACCTCG ACCACCGGTA CATCTTAAGC TCCATGTGTA CGCTCCCGCA TCCGGTCGCG GTCCGGGCGC ACTGCATGTT CATGGAGACC AATCTTGGAG ACCCCGGACT TTTCCCCGGC ACTGCGGCAC TGGAACGTCT GCTTGTCGAG CGTCTGGGCA CCCTCTTCCA TCACAAGAAC GCCGGCGGCT ATGCAACTTC GGGAGGTACC GAGTCCAATA TCCAGGCGCT CAGGCTTGCA AAGGCACTCC GTCCCGGTTC CAGTCCGAAC GTGGTTCTTC CCGAATCTGT CCATTTCTCC TTTAAGAAGG CCTGCGATCT CCTCAGTCTG GAAATGCGCA GCGTACCGCT CGGCACAGAC AGGAGGATCA TGGCAGATAA GGCTGCCGAA CTGATTGACA AAAACACTAT CTGTCTCGTG GGTGTTGCCG GCACCACAGA GTACGGCATG GTGGATCCGA TCGCAGATCT TGCAAAGATC GCTGCCCAGC AGGACATCTT CCTGCACGTG GATGCGGCGT TTGGCGGGAT GGTGATCCCA TTTCTTCCCA AGCCAGTTCC CTTTGATTTT GCTCTTCCCG GGGTTACTAC TCTTGCAGTG GACCCGCACA AGATGGGTAT GAGCACGATC CCGGCGGGGG TTCTCCTCAC CCGGGAGCCG GACATGCTTG ATGCGCTCAA TATCGACACC CCGTACCTCA CGGTAAAAAA AGGATATACG CTTGGCGGTA CCCGCCCGGG CGCCCCGATG GCCGGGGCTC TTGCAGTCCT TGATTACCTT GGCATTTCTG GAATGAAGGC TGTGGTTGCC GGCTGCATGA AGAATACAGA GCGCTTAATC GCCGGTATGG AGACACGGGG AATACAGCCG GCCGCCAGTC CCGATGTAAA TGTTGCAACC TTTGTCTGCG ACCGGGTACC AGAACCGTGG AAAGTCTCAT GGACTCGGGC CGGCCACCTC AGGATTGTCT GCATGCCGCA TGTAACTGCA GACCGTATCG AAGCGTTCCT TTCAGATTTT GGTGATATGT ATGCTTGA
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Protein sequence | MLSNGISEDD LFSFLSLHKK EDLDHRYILS SMCTLPHPVA VRAHCMFMET NLGDPGLFPG TAALERLLVE RLGTLFHHKN AGGYATSGGT ESNIQALRLA KALRPGSSPN VVLPESVHFS FKKACDLLSL EMRSVPLGTD RRIMADKAAE LIDKNTICLV GVAGTTEYGM VDPIADLAKI AAQQDIFLHV DAAFGGMVIP FLPKPVPFDF ALPGVTTLAV DPHKMGMSTI PAGVLLTREP DMLDALNIDT PYLTVKKGYT LGGTRPGAPM AGALAVLDYL GISGMKAVVA GCMKNTERLI AGMETRGIQP AASPDVNVAT FVCDRVPEPW KVSWTRAGHL RIVCMPHVTA DRIEAFLSDF GDMYA
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