Gene Mboo_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2153 
Symbol 
ID5410129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2224031 
End bp2224819 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID640869398 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001405310 
Protein GI154151692 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.250478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGCA CAATACTTGC AAGCGGGAGC AAAGGCAACT GCACCTATGT GGCGGGCAGT 
AACGGTTCCC TTCTCATCGA TGCCGGTCTG AGTGCAAAGG AGACCTTTGT GCGCATGACC
AAGACCGGTT GCGATCCGGA TCGCGTTGCT GCGATCCTTG TCACCCATGA GCACGGGGAC
CATATCAGGG GTCTGGATGT GCTTGCCCGT AAATTATCCT GCCCGGTCTA TGGAACCCAG
GGGACCCTTG CAGAGTTCCT CTCTCACCGG CGTACGTCCG ATAGGCCATT GCAGATACAG
GCCTGCCAGT ACGATACTGC CTTTTCTGCA GGAGAGTTCA GGGTCCTGCC TTTTGCCACC
TCACACGACG CTGCAGAACC CTGCGGGTTT GTCCTGCAGG AGAACGGCTC AAAAATCGGG
TACTGCACCG ATACCGGCAT TGTAACCTCC CATATGCTCG ATCTGCTCCG GCATTGTGAC
GGAGTGGTGT TGGAAAGCAA CCACTGCCCG GAGATGCTTG CAAACGGGCC GTACCCCGAG
TCCCTCAAAA GACGAATCCG TTCAAACCGG GGGCATCTTT CAAACCCGGC CGCGGCACGT
GTGCTTCAGA CACTTGGCAA GGATGTAACT CAGGTCGTGC TCTCGCACTT AAGCGAGATC
AATAACACCC CGGAACGCGC CCGTGCAAGC GCACGCGACG GGATGGGACT TTTTTTTGAG
GAAAAAACCC TGATTGTCGC ATCCCAAGAG GGTTCAAGCC CGGATTCCCC GCAGGAAATC
CTGTTGTAA
 
Protein sequence
MRCTILASGS KGNCTYVAGS NGSLLIDAGL SAKETFVRMT KTGCDPDRVA AILVTHEHGD 
HIRGLDVLAR KLSCPVYGTQ GTLAEFLSHR RTSDRPLQIQ ACQYDTAFSA GEFRVLPFAT
SHDAAEPCGF VLQENGSKIG YCTDTGIVTS HMLDLLRHCD GVVLESNHCP EMLANGPYPE
SLKRRIRSNR GHLSNPAAAR VLQTLGKDVT QVVLSHLSEI NNTPERARAS ARDGMGLFFE
EKTLIVASQE GSSPDSPQEI LL