Gene Mboo_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2146 
Symbol 
ID5409964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2216712 
End bp2218526 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content56% 
IMG OID640869391 
Producthypothetical protein 
Protein accessionYP_001405303 
Protein GI154151685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCC CTCCCGCTGA TGACAGGATA AAGGAAGCAT TTGCGCTGCA TCAGGCCGGG 
AAATATGCTG AATCCCAGGT GCTCTGCAAC CGGCTGCTGG AATCGACCCG GGATCCGTCT
CTTGAGATCC TCGCTGCCAT TAACCTTTTT TCCTTGGGAA AATTCGAGGA TGCGGAAGTG
CATTTCCGGG ACCTTGCCCG GAGGATGCCC GAGTCATCGC ATGTTCACAG TTATCTTGCA
AAGGTGCTTG AAATAAAGGG GGATACTGGT GCAATTTCCG AATATGCAGC CGCGGTCAGG
CTGGATCCCG CAAACCTCGA AGCATTGCGC AGTTATGCAG CGGGATTGAT CGCACGAAAC
GATCACCGGG GTGCATTGCC CACACTCAAA AAACTTCACA TCCTGAGCGG GCGACCCGAT
GATCTCCGGC TCCTTGTGGC AACGCTCACA GGTACCGGAC GCTATGAGGA GGCCTGTCTT
CTCTGCACAT CACAAAGCCC GGGAGCGGGT TTGGGCCGGG AATATGCCGA AGCCCTCCAG
GCTGCAGGCA GGTACCGGGA AGCCGCAGAC AAAGCATGGG AATTGCATAA TGAAAACCCT
GAGCCGGCAC TGCTCCGGAT CTACCTTGCC GCTCATGCCC GTGCCAGTGC AGACGAGGGT
ATGACGGCCT ACGCATCGGC AATAAGGGAA ACATCCGATC CCGGCATCTG TCTGGATTAT
ACGCTCCTGC TCAGGGAACG AAAAGAACTC CTCCGGGCCC TTGCCACATC AAAGAAACTC
CTTGATCTTG ACAATTGCCC GCAGTACAGG CTCCTTGCCT GCGAGATTTC TGCAGAGCTG
GGCGATCACC TGCATGCATT AGGGGAATAT GAGGGACTGA TCAGGGATAT CCTGAATATG
CCGATTGAGC CTGAGGATCT CCGACAAATT CTCCGGTCCT ATCGTAAGTA CCTGGTTGCC
CGGTTTTCCC CGGACGAGGC CAGGCAGCGG TTCCTTTGTC TGATCTCAGG GGACACCGAT
GTTACCTGCC TTGAGGAAAC TGCGCGTATG TACCAGGAGG AGGGCAAGCC CGAAGAGGCC
CGGTCCTGGT ACTACCGTGC GTACCGCGCG GATTTCCGTA CCGGGGGCCT TTCCTATGCA
ATATTCCTTG CCACCAGCGG GGATATGCGC GAATGCGAAA AAGTACTGCT TCACATCCTC
GCAAATGTCA AAAAACCCGT TGATCTCAGC AGGGTTGCCG CTGTGGTCAC AGAGCTTGAC
CAGCCCCCGC AATACATGAA GCGGCTCTCC CTGCAGCTGA TCAAAAGACT GGAAGAGCAG
CGGCAGATTC TCACCTCCGA TGACCGGGAG TGTCTCGCAG CGGCATACCT GCACCAGGCC
GCATATGCAC TTTCGCAGGG TGATGGGGCG GCGTGCATGC GCAGCTGTCT CTGCGGTATT
GATGTTTTGC CGGCTTATCC CCGCTTCTGC CAGACCGGGG ACTTTCTTAC CCTCATTAAC
CGGGCCAAAG AGCAGGCACT TACCGATACC CCGGTCATGA CGGTGAGTTT TCCGCAAACA
AAAGAGCGCA CAGGGCAGAC GCTCCAGGAA ATAGTGGATC GCGTTACACT TTCGGAGGCA
GAGCAGAAGA TCCTGATGTT CCTTGCCACT CACCGAAGGG CAAGCGAGAC GGATCTGCGC
CGGCTGCTGG GAAGCCGGAG AGTCACCGGA ATGGTCAACC TTATGATCCG GAAAATGCAG
GCACAGGGGC TTATGCTGAT AGAAAAAAAA GGAATGGGTA CTGAGGGGGA GATCTATGAA
TACTGCGGAC CCTGA
 
Protein sequence
MIPPPADDRI KEAFALHQAG KYAESQVLCN RLLESTRDPS LEILAAINLF SLGKFEDAEV 
HFRDLARRMP ESSHVHSYLA KVLEIKGDTG AISEYAAAVR LDPANLEALR SYAAGLIARN
DHRGALPTLK KLHILSGRPD DLRLLVATLT GTGRYEEACL LCTSQSPGAG LGREYAEALQ
AAGRYREAAD KAWELHNENP EPALLRIYLA AHARASADEG MTAYASAIRE TSDPGICLDY
TLLLRERKEL LRALATSKKL LDLDNCPQYR LLACEISAEL GDHLHALGEY EGLIRDILNM
PIEPEDLRQI LRSYRKYLVA RFSPDEARQR FLCLISGDTD VTCLEETARM YQEEGKPEEA
RSWYYRAYRA DFRTGGLSYA IFLATSGDMR ECEKVLLHIL ANVKKPVDLS RVAAVVTELD
QPPQYMKRLS LQLIKRLEEQ RQILTSDDRE CLAAAYLHQA AYALSQGDGA ACMRSCLCGI
DVLPAYPRFC QTGDFLTLIN RAKEQALTDT PVMTVSFPQT KERTGQTLQE IVDRVTLSEA
EQKILMFLAT HRRASETDLR RLLGSRRVTG MVNLMIRKMQ AQGLMLIEKK GMGTEGEIYE
YCGP