| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2135 |
|---|
| Symbol | |
|---|
| ID | 5410222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2207956 |
|---|
| End bp | 2208552 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640869380 |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_001405292 |
|---|
| Protein GI | 154151674 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG ACCAGTTCCG GCCGCATGTG AAAGTCTATT TCGATCCTCT TGTCCGGTTT
GCGATCCGGT GCAGGATTAC CCCCAATGTC CTGACTATTG CAGCTCTTAT CGCATCAGCC
GTTGCGGGCA TACTCTTCTA TTTCCGGCTT GAGCTCTGGG CTGTCCTTGC CGTTGCCATC
AACGCATTCT GCGATGCCAT GGATGGTGCG GTCGCCCGGG AGATGAAGAA CCAGAGCCTG
CGGGGCGACT TCCTTGACCA TGCCGTTGAC CGCTATGCGG ATATCTTCAT CATCACCGGG
ATCTTCGCAA GCGGCCTTGT ACCTTGGCCG ATCGGGGTGC TTGCCCTTAC CGGCGTCCTG
ATGTCCTCGT ACCTGGGCAC GCAGGCGCAG GCAGTTGGCG TTGGCCGGGT CTATGCCGGG
TTGCTCGGTC GTGCCGACCG GCTTGTGCTC ATCATGGTGG TAGGGATCAC ATTCATTGTC
TTCCCCATGA CGATTTACGG CCTAAACCTG CTTGGCTGGC TCCTCCTTCT CTTCGGGGTT
TTTGGCCATG TGACCGCGTT CCAGCGCTTC GCGTACGTCT GGCGGAAGAT GGAATAA
|
|---|
| Protein sequence | MTLDQFRPHV KVYFDPLVRF AIRCRITPNV LTIAALIASA VAGILFYFRL ELWAVLAVAI
NAFCDAMDGA VAREMKNQSL RGDFLDHAVD RYADIFIITG IFASGLVPWP IGVLALTGVL
MSSYLGTQAQ AVGVGRVYAG LLGRADRLVL IMVVGITFIV FPMTIYGLNL LGWLLLLFGV
FGHVTAFQRF AYVWRKME
|
|---|
| |