| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2098 |
|---|
| Symbol | |
|---|
| ID | 5410632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2171654 |
|---|
| End bp | 2172961 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640869343 |
|---|
| Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
|---|
| Protein accession | YP_001405255 |
|---|
| Protein GI | 154151637 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTACTCT TCCACTATGC GCTGGTCGAC GACCTCATCA GCAAGGAAGA ATTCGAACGG
CGCGTAGAAG AAAAGATCGA GGAATGCGGT GACCTCCTTG ATGAGCCGAC TGCAGCAATG
CTGGTTGTCG GGGCACTCGG GAGACAGCAT GTCAAGATCC GGGCCCTCTC GGGAAAATCC
AGTCTTTTTT GCTTTTTTGC ACGGGTGATC GATAAGACCG AGCCCAAAGA ATTTGACCGC
AAGGATGGCG AGAAAGGATG GGTTGCCACG CTCCTTGTAG GCGACGAGAC CGGGACCACG
CGGGTCGTTC TCTGGGATGA ACGGGCGGGG GCGGTACTTG AGATCGCCAT AGGGGACGTG
CTGGAGGTGA TCGGGAGGCA CCCGGGAAAG AGCATGCACG AGATCTATGC CCTTGCCCTG
CGGAAGGCTA CGTGCGAGAT TACCTGCACT GCAACCGTAG GTATGAGCGG GACCGGGTTA
TCATCAGAAC CGGTGGATCT CGAAGCAATC CTGATCGGTG CAGAGATGCC CCGCTCATTT
ACCCGCCGCG ATGGGACCAC AGGTGAGATG CGTGAATGCC TCATCGGTGA TGCAGAAGGG
ACTGCCCGCC TTGTCGCGTG GGCACCGGAT CACCTCATGG GCATCCCTCC GGGCAGCACG
GTCCATATCC ATGGGGCAAA GCCCGATCGC CGTGCGGAGG GTCGGGCATA CAGCATTGAT
GAGACAAGCA CGGTGAACCT CTCGGATTCC ACCGTAACCA TCCCTTTTAC CCCGCTCGGA
TCGGTTGCTG ACGCTGGGCA GTACTCCGTT ACCGGTGAAG TAAAGGCCGC ACAGGAGCCC
CGGGCGTTTA CCACAAAGTC CGGTAACCCG TCCTGGGTGA GAAACATCCG TATCAGCGAC
GGGACGGAAG AGCTCGCAGT CGTGCTCTGG GGGGAACTCG CACTCCAGCC GCTCCGATCC
GGTGACAGGG TCGAGATCTA TCACGGGTCG GCCCGGGCCG GACGCTTTGG TGGGATCGAG
CTAGGCGTGG GCAGGGGAAG CGTTTTCCGG CTGCCGCAGG AAGCGCGGCG GGAGATCACG
TTTACCGGGA CGATCATTCC CGGGAACGGG GGCACGTTCA TCGACAACGG AACCGAGCGG
TACCTCATCA CGGGCGAATA CCAGCCCGGC GCTGAGATCG CGGTGACCGG GGTGCTTGCC
GGCAGCCGTA TTATCCCTGC AACCGCAGTG CCGGCCGGGA AGACCCCCAA GGAGCTGGCC
GGTCGCCTCG CCGCCTTAAT TGCACGGATT GACGCTCCCC GCACATGA
|
|---|
| Protein sequence | MVLFHYALVD DLISKEEFER RVEEKIEECG DLLDEPTAAM LVVGALGRQH VKIRALSGKS
SLFCFFARVI DKTEPKEFDR KDGEKGWVAT LLVGDETGTT RVVLWDERAG AVLEIAIGDV
LEVIGRHPGK SMHEIYALAL RKATCEITCT ATVGMSGTGL SSEPVDLEAI LIGAEMPRSF
TRRDGTTGEM RECLIGDAEG TARLVAWAPD HLMGIPPGST VHIHGAKPDR RAEGRAYSID
ETSTVNLSDS TVTIPFTPLG SVADAGQYSV TGEVKAAQEP RAFTTKSGNP SWVRNIRISD
GTEELAVVLW GELALQPLRS GDRVEIYHGS ARAGRFGGIE LGVGRGSVFR LPQEARREIT
FTGTIIPGNG GTFIDNGTER YLITGEYQPG AEIAVTGVLA GSRIIPATAV PAGKTPKELA
GRLAALIARI DAPRT
|
|---|
| |