| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2097 |
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| Symbol | |
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| ID | 5410631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2170346 |
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| End bp | 2171638 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640869342 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001405254 |
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| Protein GI | 154151636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.579458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTGC CATCGCACAT TACAATCAGG GACGGACATC TGCACATAGG GAGCCATGAC
TGCGTCACCC TCACGGCAAA GTACGGTACC CCGCTCTACG TGACAAGCGA GGACCGGATC
TGCGAGCACT TTACGGCATA CCAGTCAGCC CTCTCCAGGA GATACGCGAA GGTTCAGGTC
CTCTTTGCAG CAAAGGCAAA CGGTAACCTT GCGGTGATGA GGGCGCTCGC CCGGCTCGGC
GCCGGGGCGG ACGTCTTTTC CTCAGGTGAA CTCGCGCTTG CCCTCGAAGC AGGGATGCCG
GCGTCAAAAC TGCTTTTTAA CGGCAGCTCA AAAACTCCAG CCGACCTCGC CCTTGCGGTA
AAACACGGTG TGAAGGTTTC GCTCGATTCT CTCGACGAAC TTCACCAGCT CGATGCAATC
GCTGCAAATG CAGGAAAAGT TGCAGAGATC TCATTTCGGG TCAACCCGGC GCTCGAAGTC
CCGACTCACC CGAAGATCGC CACCGGCCTT GCGACAAGCA AGTTTGGGAT CCCGCATGAG
CAGATCCCGG CGGCATACAA AGAAGCGCTT GCCTGCAAAA ACGTAAAACC CGTCGGAATT
CACTGCCATA TCGGTTCGCA GATCCTCGAT GTGGTGCCGT TTGCAAGGGC GGCCGAGGTC
ATGGTTAGGA TCGCAAAAGA GATTTCTGAC ATAGGAGTGA AATTAGAGTT TCTCGACCTC
GGGGGCGGAC TGGGAATTCC ATACCACCAC GATACAGACC CGGCACCGAC TCCCGAGGAC
TACGCGGCTG CAGTCATGCC GGTTTTCCTT GAAGGGATCG AGAAAGCAGG CATCACCCCC
TCGCTCTGGG TTGAGCCGGG CCGGTTCCTT GTCGCCGACT CGACCGTGCT TCTTACCCGG
GTCAATTCGA CAAAGGCCGC CCACAAGAGG TTTGCCAACG TTGATGCAGG GTTTAACCTG
CTTATCCGGC CCGCAATGTA CGACTCCTAT CACGAGATTA TTGTCGCAAA CCGTGCGGAC
GCCCCGCACA CCACTGAGTA CACCATAACC GGGCCGATCT GCGAGACCGG GGATATCCTT
GCTGCCGACC GGAAACTCCC GGAGCTTGCG GCAGGAGATC TCATTGCGGT GCTGGATGCC
GGTGCGTACG GGTATGCGAT GTCCTCGCAG TACAATGGCC GGCCCCGCTG CCCCGAGATA
CTCATCCACG GGAAGGAGGA GACGCTCATG CGGCGTCCCG AGACACTCGC TGACCTGACC
AGCGCTATGG TACATCCCCC CTGGCAGCGG TAG
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| Protein sequence | MKLPSHITIR DGHLHIGSHD CVTLTAKYGT PLYVTSEDRI CEHFTAYQSA LSRRYAKVQV
LFAAKANGNL AVMRALARLG AGADVFSSGE LALALEAGMP ASKLLFNGSS KTPADLALAV
KHGVKVSLDS LDELHQLDAI AANAGKVAEI SFRVNPALEV PTHPKIATGL ATSKFGIPHE
QIPAAYKEAL ACKNVKPVGI HCHIGSQILD VVPFARAAEV MVRIAKEISD IGVKLEFLDL
GGGLGIPYHH DTDPAPTPED YAAAVMPVFL EGIEKAGITP SLWVEPGRFL VADSTVLLTR
VNSTKAAHKR FANVDAGFNL LIRPAMYDSY HEIIVANRAD APHTTEYTIT GPICETGDIL
AADRKLPELA AGDLIAVLDA GAYGYAMSSQ YNGRPRCPEI LIHGKEETLM RRPETLADLT
SAMVHPPWQR
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