Gene Mboo_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2090 
Symbol 
ID5410920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2164785 
End bp2165636 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content54% 
IMG OID640869335 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 
Protein accessionYP_001405247 
Protein GI154151629 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGA ATCTGATCAC CCCGGTGCAG AACACCTGGT GCCCGGGCTG CGGGAACTTC 
TCGATCCAGC ACACGCTCAA GGATATCCTT ACCGACATGG AGAAGGAGGG CAGATCCCTT
GACGATGTGG TGCTTGTCTC CGGTATCGGC TGCCATGCGA AGATTGCCGA TTACCTCAAC
ATCAATACCG TCTACACCCT CCATGGGCGG ACGATCCCGG TAGCAACAGG CCTAAAACTT
GCAAACCCGG ACCTCACTGT GATCTGCTGT GCTGGCGATG GGGACGCGTA TGCGGAAGGG
CTTGATCACC TGATTTTTGC AGCCAAGCGA AACATCGATC TCACGATGAT AGTACACAAC
AACCGGGTCT ACGGCCTTAC TACCGGCCAG TATACCCCTA CATCCCCACT CGGCTTTAAA
GGGAAATCCA CCCCTTCAGG GACCGCCGAA TATCCATTTA ATCCCCTGGA GCTGATGTTT
GCAAGCGGTG CCACCTACAT CGCACGGGGA TATACAAGAA AGATGTCGCA ACTGGGACAG
CTGATCCGGC AGGGGATCGC ACACAAGGGG TTCGCCTTCA TTGATGTTCT CCAGATCTGC
GCGAGTTTCT TTAACATGAC CGAGTATTAC CAGTCCCATG TGTATGATCT CGCAGGTCAT
GACACCCGTG ATTTTGGGAA GGCATGCACC AGGGCGAGGG AGTGGGATTA TAATCTTGAT
GCCCCAATTG CGTTGGGGAC ATTCTATGAG CAGGTCCTTC CCACCTTCGA TGAGCGCCTT
CCCGTCTGGC ACCATATTCT ACAGGATGAG CGTATGAACC GGGTCCGAGA CCTTTTCGAG
GCTGCGAAGT GA
 
Protein sequence
MTRNLITPVQ NTWCPGCGNF SIQHTLKDIL TDMEKEGRSL DDVVLVSGIG CHAKIADYLN 
INTVYTLHGR TIPVATGLKL ANPDLTVICC AGDGDAYAEG LDHLIFAAKR NIDLTMIVHN
NRVYGLTTGQ YTPTSPLGFK GKSTPSGTAE YPFNPLELMF ASGATYIARG YTRKMSQLGQ
LIRQGIAHKG FAFIDVLQIC ASFFNMTEYY QSHVYDLAGH DTRDFGKACT RAREWDYNLD
APIALGTFYE QVLPTFDERL PVWHHILQDE RMNRVRDLFE AAK