Gene Mboo_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2084 
Symbol 
ID5410914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2158655 
End bp2160112 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content54% 
IMG OID640869329 
Productcation transporter 
Protein accessionYP_001405241 
Protein GI154151623 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGT TGCTCTATCT TTCCACCATC TTTGCCGATC TCGGTGCGGT TTTTTTCTTT 
ATTGCCCCGG TCACGGCCAT TCCCCTGGTG GTAACCGTGC TCTATTCGGA ATGGGACCTC
TTTTTACCTA TGGCAACCGT GCCGGTCCTC CTCTTCACCC TGGGATTCCT GTTAAAACGC
CTGCCCCGAA ACGAGCGTGA AAACCGGCTT TCCACTGCGC TCTGCTCAGT TGCTCTTTTC
TGGTTTACCT GTGCCATAGT AAGCGGAATT CCCTTCATGC TGGGCCTCCG CATGGGATTT
ACCGATGCTG TTTTCGAAGG AATGGCCGGG TGGACAGGAA CTGCATTTTC CCTGATTCCC
TCTCTTGATA CCGCTCCCCA TACCCTTCTT TTCTGGCGCT CGTTCATGCA ATGGATCGGG
GGAATCGGTA CGATCGCTTT TGTCATTGCG CTTGCAAGCA GCACCGGGCT TTTCCAGGGA
AAACTCTTCC GGCCTGAAAG CAGGGAGGAA CCGCTGATGC CCGGTATCAT CTCGAAAGGA
AAGGCCATCT GGAAAATTTA CGGACTCCTG ACGTTTGTCG CGATCGGTCT CATCCTCTTT
ACCGGTCTAT CCCTCTGGGA TTCGGTCAAC CTTGCGCTCA CCGCGATCTC CACGGGAGGT
TTTACTCCAC ATACCGGCGG TATCCTTTCG TACCACAATG TGTTCCTGGA ACTGTTGCTC
ATTCCCCTCA TGATTGCAGG AGCACTGCCC TTCCGCCTGT ACTATCTTAT CGCAGAGAAC
CGGCGCTGGA GTCTTTTCGG TGATGAACAG GTCAAACTCT TTTTTGTTGT TGCGGCCATC
GGTACTGCGG TTCTTACGTA TGATCTGGTC TATTTCGGGA ATGCGGATTT GCCTGCAGCC
CTTTTCGAAG GGGTCTTCAT GGCGGTCTCT GCCCTTACCA CCACCGGGTT CCAGATCGCG
GACCTCCAGA CATGGGCAAG TGTGACGCTT TTCTTTTTGA CGATGCTCGT CTTCGTTGGC
GGTTGTTCCG GGAGTTCGGC AGGGGGGATC AAGCTGAACC GGGTGGTGCT GGGGTTCCGT
GCCCTGATCT GGTGGTTCCA CCGGTTGTTC GTGAGCGGGA AGGTTCTGAT CCCTTTCCGG
AGTGAAGGCC GGATTATCCC GCGTGCAACT GCCGAGCTGG AAACCGCAAA GACCCTGCTT
GTCATCATCC TTTCCGTTAT CCTTATCTTT GTTGCCACCC TCGTCGTCCT CCAGTTCCAG
CAGGCATCTG CTCCCCTCAA TGACATCCTC TTTGATGTCA CGTCCGCATT TTCTACCTGC
GGGATCACCT CGGGATATGT CTCTCCGGAT ATGCCGCTTG TCTCGAAATG GGTTTTTATT
ATCGTGATGT GGCTGGGAAG GCTTGAGGTG ATCCCGGTGA TAGTCCTGTT TATGGCACTC
TTCCGGGGTT CTGATTAG
 
Protein sequence
MRRLLYLSTI FADLGAVFFF IAPVTAIPLV VTVLYSEWDL FLPMATVPVL LFTLGFLLKR 
LPRNERENRL STALCSVALF WFTCAIVSGI PFMLGLRMGF TDAVFEGMAG WTGTAFSLIP
SLDTAPHTLL FWRSFMQWIG GIGTIAFVIA LASSTGLFQG KLFRPESREE PLMPGIISKG
KAIWKIYGLL TFVAIGLILF TGLSLWDSVN LALTAISTGG FTPHTGGILS YHNVFLELLL
IPLMIAGALP FRLYYLIAEN RRWSLFGDEQ VKLFFVVAAI GTAVLTYDLV YFGNADLPAA
LFEGVFMAVS ALTTTGFQIA DLQTWASVTL FFLTMLVFVG GCSGSSAGGI KLNRVVLGFR
ALIWWFHRLF VSGKVLIPFR SEGRIIPRAT AELETAKTLL VIILSVILIF VATLVVLQFQ
QASAPLNDIL FDVTSAFSTC GITSGYVSPD MPLVSKWVFI IVMWLGRLEV IPVIVLFMAL
FRGSD