Gene Mboo_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2083 
Symbol 
ID5409792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2157763 
End bp2158575 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID640869328 
Productnitrogenase 
Protein accessionYP_001405240 
Protein GI154151622 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA TCGCCCTGTA CGGAAAAGGC GGTATCGGAA AGTCCACGAC TTCTGCGAAC 
CTGTCTGCAG CCCTTTCCCT TTCAGGGTAC AACGTTCTCC AGATTGGTTG CGATCCCAAG
CGCGATAGTA CCAGGATGCT GATGCAGGGA CGGTTGATTC CTACAGTTAT GGATCTGGTG
CGCGAACGGG GAGCGGCATC AGTAACCCCG GCGGATGTAG TCTATACCGG TTTTAATGGC
ATCCGCTGCG TTGAAGCCGG AGGGCCGGAA CCTGGCGTTG GTTGCGCCGG GCGGGGGATT
ATCGCCACGT TCCAGCTGCT GGAAAAATTC GGTACGCTCA CGGGAGATGT GATCGTGTAC
GATGTGCTGG GCGATGTGGT CTGTGGCGGG TTTGCCATGC CGATGCGGGA AGGGTACGCC
CAGGAAGTGT ACCTTGTAAC TTCGGGAGAA CTTATGTCCC TGTATGCGGC AAACAACATC
TGCAAGGCTG TACAGAGGCT GAGTGCCCGC CCGAGGAGCA TGTGCCGCTT GGCCGGGGTT
ATCTGCAACG CCAAGAACCT GCCCCGGGAA GAGGAGCTGG TGGCAGAGTT TGCCCGCCGG
GTCAACAGCC ATCTTCTCCA GTATATCCCG CGTGATCGCA CGGTCCAGCT GGCAGAACTG
GACCGCAAGA CCGTGCTTGA GTACGAGCCG TCATCTGAAC AGGCACAGAG GTACAGGGAC
CTTGCAGCCC GGGTTATGGA AAACACGCGC TTTACCATAC CCACCCCCCT TGAGATCGAT
GAGCTTGAAT CACTTGCCCG CCAGTTCGTG TAG
 
Protein sequence
MKQIALYGKG GIGKSTTSAN LSAALSLSGY NVLQIGCDPK RDSTRMLMQG RLIPTVMDLV 
RERGAASVTP ADVVYTGFNG IRCVEAGGPE PGVGCAGRGI IATFQLLEKF GTLTGDVIVY
DVLGDVVCGG FAMPMREGYA QEVYLVTSGE LMSLYAANNI CKAVQRLSAR PRSMCRLAGV
ICNAKNLPRE EELVAEFARR VNSHLLQYIP RDRTVQLAEL DRKTVLEYEP SSEQAQRYRD
LAARVMENTR FTIPTPLEID ELESLARQFV