| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2074 |
|---|
| Symbol | |
|---|
| ID | 5409783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2149459 |
|---|
| End bp | 2150187 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640869319 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001405231 |
|---|
| Protein GI | 154151613 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2968] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.223483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGA TGAGACTTGT TGTGTGTGCC CTGGTGCTTT TCGCCATGGC AATGATCGGT
TGTGTGGCGG CTGCAGACAC CAGCATGGAT CATGTGATCT CTGTGAGTGG GAGCGGCACG
GTCACGGGCA CCCCGGACCG GGTTCAGATC AGTTTCGCCG TCCAGACCCA GAACGCAGAT
GTCAAGATTG CACAGTCCAG TAACGCGCTT GCAATGAACA ATGTCATGGA TGCGCTCGCG
GCAGCGGGGG TTCCCCGCGA CCAGATGAAG ACCACCGGTT ACACGATCAC CCAGATCAAC
CAGCAGGACG ACAATGGTAT CCTTTCCGGT CCGGCGGCGA CCTACCAGGT GACAAACACC
CTCCTGTTGA CCCTCAAGGA TACCAATACC ACCGGCCAGA TCATCGATAC CGCGGTCAAT
GCCGGGGCAA ACCAGGTAAA CTCCATCCAG TTCATGCTTT CCGACGAACA GGCTCAGGCC
CTTCGGAGCC AGGCTCTGAC TAAGGCCATT ACAAACGCGA GAGCCGATGC CGATGCCGTA
GCCGACGCCC TCAACGTGAC TATTACCGGG ACCCAGGAGG CCGACGTCAG CCAGGGATAC
ACACCTGTAG TGTACAGCAA TTACGACACG ACAATGATGT CCGCGAAAGC GGCAACAGCA
CCAACTCCAA TCCAATCCGG GGACATCACG GTTACTGCCC AGGTGTCGGT TACCTATACG
ATCCGCTGA
|
|---|
| Protein sequence | MQKMRLVVCA LVLFAMAMIG CVAAADTSMD HVISVSGSGT VTGTPDRVQI SFAVQTQNAD
VKIAQSSNAL AMNNVMDALA AAGVPRDQMK TTGYTITQIN QQDDNGILSG PAATYQVTNT
LLLTLKDTNT TGQIIDTAVN AGANQVNSIQ FMLSDEQAQA LRSQALTKAI TNARADADAV
ADALNVTITG TQEADVSQGY TPVVYSNYDT TMMSAKAATA PTPIQSGDIT VTAQVSVTYT
IR
|
|---|
| |